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berkeley_reactor_200306_planktonic_scaffold_176984_44

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(52195..53010)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPH7_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 268.0
  • Bit_score: 208
  • Evalue 6.40e-51
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 256.0
  • Bit_score: 212
  • Evalue 9.60e-53
AraC family transcriptional regulator {ECO:0000313|EMBL:AKD53853.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.9
  • Coverage: 256.0
  • Bit_score: 212
  • Evalue 4.70e-52

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Taxonomy

Spirosoma radiotolerans → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 816
ATGCCCGGTATCAACTTTCCCGGAGTTATGATCAATACTTATACCGTATTGCCGCCTGCGGGCATTGCCGCTTATGTAACCGGTATACTGGTTATCGAATATCGCTCGGTAACCGACCGCTTTACCGTGCCGCTTTATGCGAATGGCGCGCCCACCCTGGTGTTTCAAACGGTTGAAGGCGTTTGCGCGGGCGCCGGTACCGGTTATCTTTCCCTCTTCGGGCAGACGGTACAACCGGAGCAATTGTCGATCGCCGGACCTTTTACGCTGATCGCCTGCTTTATGAAACCGCATACCCTGCAGCCCTTATTCGGTATCGGTGCTGCCGCCCTCAGTAATAGTTATACCGATCTCGGTTATACCGCACCGGCGAGGCAATCGGGTATTGTCGACCAGTTATTACAGGCGGCCTCGGTAAGCCGGCAACTGGAACTCCTGGTGGGTTTTATTGCTTCGTTAGCCGCCCATGCCGGTAGCTTCAACGCTATGGCGCTTATGGCCACGGAGTACCTGGGTACACATCTTCATGCCAACGCGCTTGCCGATCTTCAGAAAAAAATGAAGGTCTCGGAGCGTTCGCTCCAACGGCTCTTCGAAAACAATATTGGTGTATCGCCCAAGATGTACAAACGCATCTGCCAGTTCGATCAGGCCTTTAAACAATTAAACCAACACCATTTCAGGATCCTGACCGACATTGCCTACGAACACAATTTCGCCGATCAAAGCCACTACAACCGCGTATTTCGCGAGTTTACGGGTATTACGCCCCAGGAATATATTCGGTTGAGTAAGCCTTATAATCCCGAATTCTGA
PROTEIN sequence
Length: 272
MPGINFPGVMINTYTVLPPAGIAAYVTGILVIEYRSVTDRFTVPLYANGAPTLVFQTVEGVCAGAGTGYLSLFGQTVQPEQLSIAGPFTLIACFMKPHTLQPLFGIGAAALSNSYTDLGYTAPARQSGIVDQLLQAASVSRQLELLVGFIASLAAHAGSFNAMALMATEYLGTHLHANALADLQKKMKVSERSLQRLFENNIGVSPKMYKRICQFDQAFKQLNQHHFRILTDIAYEHNFADQSHYNRVFREFTGITPQEYIRLSKPYNPEF*