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berkeley_reactor_200306_planktonic_scaffold_176984_48

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(56176..57351)

Top 3 Functional Annotations

Value Algorithm Source
Probable ABC-type transport system, permease component n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GWD5_FLAPJ similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 384.0
  • Bit_score: 512
  • Evalue 2.30e-142
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 384.0
  • Bit_score: 512
  • Evalue 6.40e-143
Probable ABC-type transport system, permease component {ECO:0000313|EMBL:CAL42408.1}; TaxID=402612 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 384.0
  • Bit_score: 512
  • Evalue 3.20e-142

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Taxonomy

Flavobacterium psychrophilum → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1176
ATGAAGCTATTTTTTGAATTGATCAGGAGGGAGTTCCGGCTGTTTTTTGCCAATAAGGTATTGCTGGTCCTGTTTTGCGGGGCGCCGGTGCTTTATGGCGTACTGATCGGTAATGTCTATAAAAAAGGAAAGGTGACCGACCTGGGCGTGGTCGTGGTGGATGAAGACCGTTCGGTAATGAGCCGTAAGCTGATCCAGATGATCGATGAAAGCGAGGTGACGAATGTAGTCCGCGTCCTGAACAGTACCGAACGATCCAGGGCAACGGCCCTGTCGCTCGATGCCCCTTGTGTGGTTGTGGTCCCGGCCCGTTTCGAAGCCAGTATCCTGCTAAAGCGTTATCCCGAGCTCACGGTATTTATCGATGCCTCCAATACGCTTACGGCCAACTTTGCCGGTACATCGGTTAATGTGGCTGCCGCTACCCTCAAGGCCGGTATCCAGATCGAAGCCCTGAAAAAGCAGGGTATGCCCGAGAGTATTGCCCAGACACAATACGAGCCCTTTAAGATCACGCTTATAAAAGAAAACATACGCAGCAATAATTATCTCTATTTTATGTTGCCGGGTGTATTGCTCACGGTATTGCAGCAGGTATTGTTGCTCGGCCTGGCCTTGTCTTTCTCGGCCGAGTTCGAATCGGGCTCCTTTGCCGACCTGGTGCGAAAAATGCCCAATCCCTTGTTGTTGCTGCTGGTAAAAATATTGCCTTACCTGCTGATGTCCCTGGGCATTTTCGTGCTTTATTATTGCTTCGGATGGTGGTACCGGATGCCGTTGCATGCTGCGCTGCTGCCCTTTTTGCTGGGTAGTGTCCTGTTCCTGTTCGCAGTCTGCTTCTTAGGCGTATTGGGTAGCATCTGTCTGCCTACACAGCTTAAAGCTACCGAAGTGCTGATGGTAGTGGCAACGCCAAGTTTCATCCTGAGCGGTTTTACCTGGCCTTTAAGCCAGATGCCGGTATGGGTGCAGACTATAGCCGATGTCATTCCTTTAACGCATTATCTTAAAATATTCAGGGTGCTTTTTATCGAACAGGGTAGCTTTGCCAGGATACAACAGCCTTTGCTGGCCCTGGCCCTGATGACGGTCGTTTTCTTCGTATTAAGTATGCTGGCTTTGCGGGTAAAGATAAAACGCTACCGGAAACAGGTATCGGCCGGTAAGGCCGCGTAA
PROTEIN sequence
Length: 392
MKLFFELIRREFRLFFANKVLLVLFCGAPVLYGVLIGNVYKKGKVTDLGVVVVDEDRSVMSRKLIQMIDESEVTNVVRVLNSTERSRATALSLDAPCVVVVPARFEASILLKRYPELTVFIDASNTLTANFAGTSVNVAAATLKAGIQIEALKKQGMPESIAQTQYEPFKITLIKENIRSNNYLYFMLPGVLLTVLQQVLLLGLALSFSAEFESGSFADLVRKMPNPLLLLLVKILPYLLMSLGIFVLYYCFGWWYRMPLHAALLPFLLGSVLFLFAVCFLGVLGSICLPTQLKATEVLMVVATPSFILSGFTWPLSQMPVWVQTIADVIPLTHYLKIFRVLFIEQGSFARIQQPLLALALMTVVFFVLSMLALRVKIKRYRKQVSAGKAA*