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berkeley_reactor_200306_planktonic_scaffold_176984_58

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 66004..67722

Top 3 Functional Annotations

Value Algorithm Source
Cna B domain protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BN48_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 29.2
  • Coverage: 487.0
  • Bit_score: 167
  • Evalue 3.40e-38
Cna B domain protein {ECO:0000313|EMBL:EIJ32791.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.2
  • Coverage: 487.0
  • Bit_score: 167
  • Evalue 4.80e-38
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 26.5
  • Coverage: 574.0
  • Bit_score: 166
  • Evalue 2.20e-38

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1719
ATGTACCGTACACAAAAAACGCTTATCGCATCATTATTACTTACTACTACCGCTTTTTACGCGCAGGCGCAAACGCCATGTACCTACCAGGTACCCACTACAGCAACCAATATCCAAGTGCCTAGCGGCGCCACCTGGTGTGTTACCGCAAATATGTCGGCCAACGTAGATATCGCCAGCGGCGGTACCTTACGCATCGCTCAGGGTGTTACCTTTAACCTCTACAGCATGAACAACTTTAACGGGACGATCGAAAACTATGGTACCCTTACCACCGGCGGTATTAATTCAGGATCCGGCGCCACGATACGCAATGCGGGTACCACTACCGTTAACAGTGGCCTCAACGCCAACTCAGGCATACAACTCATCAACGAAACCAACGGCACCTTCAACCTTAACGGTGGCGCTAACCTTAACGGAGGAAGCGCGCTGACAAACAGCGGCAGCATCAACATCAACGGTAGCCTTAACATGAACGGCACTGTTACTATTACCAATAACACAGATGCTACAATCAATTTCAGCAACGGTACCAACTTAAGCGGTAACGGCAGCACACTGACCAATAAAGGTATCATCAACTTTAACAGCGGCGACTTCAATACCCATAGCGGAACAACACTGAACAACTCCGGTAAGCTGACCGTTTTCGGCGGCAACTTTAACCCTTCCGGCGCTGTTACCAACAAAGGCTGGTTTGATGCACGTCACTTTATCAACATCAACAGCGGCGCAGTTATCGTCAACAAATGCCGTTTCGTAGCACGCGAAGGATTCAACAATAACGCCAACTTCACCAACGAAGGCCTGGTATGGGTAAGCAATGCCGGCAACCCTAAGATCACCATTAACGGCGGTGCTACATTTACCAACTCAGCCGATGGTAAAGTAAGGGGTGCTGACTTCGACAACAATGGTACTGTAGTAGGCTCCGGCGAATTTTACTTTACCGGCCTTACCCGCCAGCAAGGTTCTTTCAACGGCAATAACTCCAGCAACCCGATCAAATTTTTCGGAACAAACACTACCCCTAACTCCAACTACCCAGGCAGCTACTTTAACGTAGGTATACAAGGTAACAATGTAACCAGGCCAGCATCTTTAGTGCCTGCAGACACCACCTCCTTCTATACTTTCTGCGGCGAACAGACCTTTACAACCGGCGGTACCCCACTTCCTGTAACCCTGACCAGTTTCAGCGCTTATGCTGAAAACTGCGCGGTTATCCTGCGTTGGGCAACAACAGAAGAAACCAAATTCGATCATTTCGAAATAGAAGGCAGCAGCAATGCTACACAGTTCAAAACACTGGCACTGGTAGCAGGCCAGGGCGCTAAAGGCGGCAACTACAGCTACACGCTTGCCCAAACTTCCGACGTCCGTTACTACCGTCTGAAAATGACCGACCTGGGTAATAAAGTAACCTACAGCAAAACGCAGAACGTTACATCAACCTGCACCGGCATGGAAACCAGCTGGAGCGTATATCCTAACCCTACAAGCCAGAACAATATGATCCAGGTAAGCAACATCAGCTTAACTGAAGGCCAGGTAGTGGTTACCAACCTGCTGGGTGTAGCGGTTAAAACCGTACCCTTAGCTGTAGCCCGCCAGGGATTCCAGATGACCGGTGTATCTGCCGGCACTTACCTGATCAGCGTGTACAGCCAGGATGGCAAACGTCTCGCAGGCGCACAAAAACTGGTAGTACGTTAA
PROTEIN sequence
Length: 573
MYRTQKTLIASLLLTTTAFYAQAQTPCTYQVPTTATNIQVPSGATWCVTANMSANVDIASGGTLRIAQGVTFNLYSMNNFNGTIENYGTLTTGGINSGSGATIRNAGTTTVNSGLNANSGIQLINETNGTFNLNGGANLNGGSALTNSGSININGSLNMNGTVTITNNTDATINFSNGTNLSGNGSTLTNKGIINFNSGDFNTHSGTTLNNSGKLTVFGGNFNPSGAVTNKGWFDARHFININSGAVIVNKCRFVAREGFNNNANFTNEGLVWVSNAGNPKITINGGATFTNSADGKVRGADFDNNGTVVGSGEFYFTGLTRQQGSFNGNNSSNPIKFFGTNTTPNSNYPGSYFNVGIQGNNVTRPASLVPADTTSFYTFCGEQTFTTGGTPLPVTLTSFSAYAENCAVILRWATTEETKFDHFEIEGSSNATQFKTLALVAGQGAKGGNYSYTLAQTSDVRYYRLKMTDLGNKVTYSKTQNVTSTCTGMETSWSVYPNPTSQNNMIQVSNISLTEGQVVVTNLLGVAVKTVPLAVARQGFQMTGVSAGTYLISVYSQDGKRLAGAQKLVVR*