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berkeley_reactor_200306_planktonic_scaffold_176984_60

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(69964..73281)

Top 3 Functional Annotations

Value Algorithm Source
Cell wall/surface repeat-containing protein n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L1E8_SAPGL similarity UNIREF
DB: UNIREF100
  • Identity: 28.9
  • Coverage: 1039.0
  • Bit_score: 283
  • Evalue 6.30e-73
cell wall/surface repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 28.9
  • Coverage: 1039.0
  • Bit_score: 283
  • Evalue 1.80e-73
Cell wall/surface repeat-containing protein {ECO:0000313|EMBL:AFC23489.1}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis (strain Lewin).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.9
  • Coverage: 1039.0
  • Bit_score: 283
  • Evalue 8.90e-73

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Taxonomy

Saprospira grandis → Saprospira → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3318
ATGAACAAACATCTATTACGATTAGCCTTATGGCTCATCGTTTGCATAGCCCGGGTTATACCCGCTGGGGCACAGACACAGGTTACTATCGGTACCGGTACCGGAAGCGGCACCTCTACGCCCATCTCCCGTTTTTACGAATACTCGCTCAGCGAATCGATATATCTTGGATCCGAATTCGGCGGTAATACCGGTAATATCACGGCTATTGCCTACGACAAAGCTTCGGGTTCCAGTACCTCGGTAACGCCATCGGTAAGCATTTACATGAAGCTCACCACAAATAGTACAGTGGGTACCAGTACCTACCCGCTCAGTTTAACCGGGTATACCCTCGTATGGAGCGGCAGCTTCCCGAATGGAGCGCCGGGCTGGCAGGAGGTAACGCTGGATGCGCCTTTCCCCTTCCCTGCAGCAGGGCAGCATCTTTCGGTGGCGGTATTGAACAACAGTGGCGCCGTCATTCCTTCGGGCAGACCGCAGTATCGCTATACAACTACTAATGTACGCCAGGAGGCCGATTATACCGGTTCTTCGGCCTGGGATGCCACGAAGACCCTGATCCCGCACTGGGAGCGCCCTAACGTTCGGTTTACGCTTGGTGCCTTGTCCTCTTGTCTGGCGCCTTCCGCCATAACGGTAGGTACGGTTACGGCTACCACAGCCCAGTTGAGCTGGACTGCGCCGGCTGTCGCGCCTACAGCCTACGAATGGGAGATCCGGACAACGGGTCTGCCGGGAAGCGGCGCAGCAGGACTGGTCAACAGTGGTACGACTACTGCTACAACATTAAATAGCTCCGGTCTTCCGGCTGCTACCACCTCTTATTTTTACATCCGCTCGCAATGCGGATCGGGCCAGTACAGTCTTTGGTCCGGCGGTGCCGCCGTGGTTACACCCTGTGCGCCCGTTACCACTTTTCCATGGACAGCCGGCTTTGACAACCTGCTGTTGCCCGATTGTTGGTTCAATACCAGTAATGCTAACCGCTACTGGGAATTTGTAACGGCAGATGCCGGTCATGGCGCCACGCTGCCACATAGTGGCGCGGGTATGGCCCGTGTCGATGTATATAACGCGATTACGGCCAATAATCCCATGCGCCTGGTATTGCCCCCCATGACTATCGGTAGCGGCATGGAGCTTCAATATTGGGCCTGGATCGGTAACGAAGGCGCTGCCGCACCTTTGTCGGTCGAAGTATCGGCCAATGGCGGTAGCACTTACAGCACCCTGTATAGCCATAACAATACCAGTAATGTTAATCAATGGCAGGTCAATACGCAGTCGCTCGCAGCCTATGCCGGTCAGACGATATTGATCCGCTTCTCCGCTACGAGCAATTATGGTACCGGTTCCTGCAACCTCGGGCTCGATGATATAACCGTACAGGCGGCATCTGTTTCGCCCGTTGTTATCGATAGCGTTAAGGTAAAAACCGTAGCCAATGCACCGGCAACAATCAACAGCAATGCCGGCAGTTTGCAGCTGAATGCTTTTGTTTACCCGGCATCTGCCAGCCAGGCGGTAAGCTGGAGTATCGTACCCGTAAGCGGTGCAGCGACCATCAATACCTCCGGTTTGGTAACGGCCTCTGGTAATGGTACCGTATGGGCCAAAGCCATATCTGTAACCGACGTTTCTAAGAAAGATTCATTACTCGTTACTATTTCTGGTCAGACCATCTTGATCGATAGCGTTAAGGTAAAGACAGTAGCCAATGCCCCGGCAGTAATCAACAGCAATGCTGGCAGTTTGCAGCTGAATGCTTTTGTTTACCCGGCATCGGCCAGACAGTCGGTAAGCTGGAGCATCGTACCCGTAAGCGGTGCAGCGACCCTCAATGCCTCCGGTCTGGTAACGGCCGCTGGTAATGGTACCGTATGGGCCAAAGCCATATCTGTAGCCGACATTTCTAAAAAAGATTCTTTACTGGTCACCATCTCCGGTCAGACCATCTCGATCGATAGCGTTAAGGTAAAGACAGTAGCCAATGCCCCGGCTGTGATCAGTAGCAATGGCGGTAGTTTACAGCTGAATGCTTTTGTTTACCCGGCATCGGCCAGCCAGGCGGTAAGCTGGAGCATCGTACCCGTAAGCGGTGCAGCGACCATCAATGCCTCCGGTTTGGTGACAGCTTCTGCCAATGGCACGGTATGGGCCAAAGCCGTATCTGTAGCCAATACTGCTAAGAAAGATTCTTTACTGGTTACCATTTCCGGTCAGACCATCTCGATCGATAGTGTCAAAGTAAAGACGGTAGCCAATGCACCGGCAGTAATCAATAGCAATGGCGGTAGTTTACAGTTGAATGCTTTTGTTTACCCGGCATCGGCCAACCAGGCGGTAACCTGGAGCATCGTACCCGTAAGCGGTGCAGCGACCATCAATGCCTCCGGTTTGGTAACGGCATCAGCCAATGGCACGGTATGGGCCAAAGCCGTATCTGTAGCCAATACTGCTAAGAAAGATTCTTTACTGGTTACTATTTCCGGTCAGACCCTTTCGATCGATAGTGTCAAAGTAAAGACAGTAGTCAATGCACCCGCAGTAATAAATAACAATGGCGGCAGTTTACAGTTGAATGCTTTTGTTTACCCGGCATCTGCCAGTCAGTCGGTAACCTGGAGCATCGTGCCCGTAAGCGGTGCAGCAACCATCAATACCTCCGGTTTGGTAACAGCCTCGGGTAATGGTACCGTATGGGCCAAAGCCGTATCTGTAGCCAATACCGCTAAAAAAGATTCTTTACTGGTTACCATTTCCGGTCAGACCATTGCTATCGATAGCGTTAAGGTAAAAACCGTAGCTAATGTACCGGCGGTAATCAGCAGCAATGGCGGTAGTTTACAGCTGAATGCTTTTGTTTACCCGGCATCCGCCAGTCAGTCGGTAAGCTGGAGCATCGTACCCGTAAGCGGAGGAGCTACCATCAATGCCTCCGGTTTGGTGACAGCCACGGGCAACGGTACCGTATGGGCTAAGGCCGTTGCACAAGGTAATACCAATAAGCGGGATTCAATCAGGATCACGATAACCGGACAGGGTCTGGGCATCGCCGACAAAGGCAGCGAGATCGGATTGTATATTTTCCCGAATCCTGCCCGCGATGTACTGACCTTACATATTGAAAAACAACACCCCGATCTTACGGTCCGGTTTACGGATAGCAGAGGCGTGTGTTATCGTGAGCTCCGGGTTAAAGGCGGTAAGGATACGCGGCTCCCGGTAAATATGAGCAATGCCGCTCCCGGTATCTATTTCATCACGATCACCGGTAAGGATATCCTGCTGCACACCAAAGTGTCCAAACAATAA
PROTEIN sequence
Length: 1106
MNKHLLRLALWLIVCIARVIPAGAQTQVTIGTGTGSGTSTPISRFYEYSLSESIYLGSEFGGNTGNITAIAYDKASGSSTSVTPSVSIYMKLTTNSTVGTSTYPLSLTGYTLVWSGSFPNGAPGWQEVTLDAPFPFPAAGQHLSVAVLNNSGAVIPSGRPQYRYTTTNVRQEADYTGSSAWDATKTLIPHWERPNVRFTLGALSSCLAPSAITVGTVTATTAQLSWTAPAVAPTAYEWEIRTTGLPGSGAAGLVNSGTTTATTLNSSGLPAATTSYFYIRSQCGSGQYSLWSGGAAVVTPCAPVTTFPWTAGFDNLLLPDCWFNTSNANRYWEFVTADAGHGATLPHSGAGMARVDVYNAITANNPMRLVLPPMTIGSGMELQYWAWIGNEGAAAPLSVEVSANGGSTYSTLYSHNNTSNVNQWQVNTQSLAAYAGQTILIRFSATSNYGTGSCNLGLDDITVQAASVSPVVIDSVKVKTVANAPATINSNAGSLQLNAFVYPASASQAVSWSIVPVSGAATINTSGLVTASGNGTVWAKAISVTDVSKKDSLLVTISGQTILIDSVKVKTVANAPAVINSNAGSLQLNAFVYPASARQSVSWSIVPVSGAATLNASGLVTAAGNGTVWAKAISVADISKKDSLLVTISGQTISIDSVKVKTVANAPAVISSNGGSLQLNAFVYPASASQAVSWSIVPVSGAATINASGLVTASANGTVWAKAVSVANTAKKDSLLVTISGQTISIDSVKVKTVANAPAVINSNGGSLQLNAFVYPASANQAVTWSIVPVSGAATINASGLVTASANGTVWAKAVSVANTAKKDSLLVTISGQTLSIDSVKVKTVVNAPAVINNNGGSLQLNAFVYPASASQSVTWSIVPVSGAATINTSGLVTASGNGTVWAKAVSVANTAKKDSLLVTISGQTIAIDSVKVKTVANVPAVISSNGGSLQLNAFVYPASASQSVSWSIVPVSGGATINASGLVTATGNGTVWAKAVAQGNTNKRDSIRITITGQGLGIADKGSEIGLYIFPNPARDVLTLHIEKQHPDLTVRFTDSRGVCYRELRVKGGKDTRLPVNMSNAAPGIYFITITGKDILLHTKVSKQ*