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berkeley_reactor_200306_planktonic_scaffold_176984_243

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 267515..268561

Top 3 Functional Annotations

Value Algorithm Source
Signal transduction histidine kinase, LytS n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PT72_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 31.8
  • Coverage: 349.0
  • Bit_score: 190
  • Evalue 2.30e-45
signal transduction histidine kinase LytS similarity KEGG
DB: KEGG
  • Identity: 31.8
  • Coverage: 349.0
  • Bit_score: 190
  • Evalue 6.50e-46
Signal transduction histidine kinase, LytS {ECO:0000313|EMBL:ACU60862.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.8
  • Coverage: 349.0
  • Bit_score: 190
  • Evalue 3.20e-45

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1047
ATGAGAAAAACCAAATGGCATCTTCTTGTCTTGCTATGCTACTCCGTCTGGGCAATGGCCATGGACTTTTTTTTCGCACCCAGTTTCCATCTTCCTATCGAGTTCATTATCCTGTCGCAACAGTTCTGGATATTTTATACCGCCTACGCTTTTCTCTATTTCCTGTTTCTCGCGCCCAAGCGTAAAAAGCTGTACAGTATACCGCTCCTGCTGATCTGCTTCGGGGGCAGTTATGCCATTACCCTGTTCTACTGTTTTGTTTATAACAAACTGTACGAACCGATGGAGTTTACACAACGCCAGATCATTTTCACCGTTACCCAGATTACGACCCAGTTCTTTATCCCGGCCGTAGGTTATTTCTTCGTCGTTAAATTCTTTATGAAACAGGAAAAGGTTAAGGAGCTGGAACAGCAGAAGCTGATCCTGCAAAAAGAACTGCTGCAATCGGAAAATAATTTCCTGCGCGCCCAGATCAACCCGCATTTTCTGTACAACTGTCTCAACTTCTTTTATTCGGAAACCTTCCAGCAACGTCCCGATGTAGCCGAGGCCATTATGTTGCTGTCGCATATGATGCGTTATTCGCTTACCGACTTTTCGGCCACCAATGGCCTGGCCAACCTGGAGGACGAGATGGAACATATCCAGAACATCGTCCAGCTCAATAAATTCAGGTTCTCCGACAAAATACCGGTAGAACTGAAGATCGAAGGTAATACCGAGCATAAAAAGATCGTACCGATGTTGCTGATGACCCTGGTGGAAAACATATTCAAACACGGCGACCTGAAAGACGCCACCAATAAAGCTTCTATAACCTGTACGATCGATGAAAAAGAGAAAAAACTCATCTTTACTACGGTTAACAAGAAGAATCCCGTTATTGCAGGCATATCCCAGGGCCTGGGTATAAGCAATATCAGGCAACGCCTGGTACTGCTGTACAACAGTGACCACGGACTAACCACCGAGAACGATGGCAACTTATTTAAAGCCACGCTGACGATCCCCTATTTCGAACCTCAACAAACCCCACACAGATGA
PROTEIN sequence
Length: 349
MRKTKWHLLVLLCYSVWAMAMDFFFAPSFHLPIEFIILSQQFWIFYTAYAFLYFLFLAPKRKKLYSIPLLLICFGGSYAITLFYCFVYNKLYEPMEFTQRQIIFTVTQITTQFFIPAVGYFFVVKFFMKQEKVKELEQQKLILQKELLQSENNFLRAQINPHFLYNCLNFFYSETFQQRPDVAEAIMLLSHMMRYSLTDFSATNGLANLEDEMEHIQNIVQLNKFRFSDKIPVELKIEGNTEHKKIVPMLLMTLVENIFKHGDLKDATNKASITCTIDEKEKKLIFTTVNKKNPVIAGISQGLGISNIRQRLVLLYNSDHGLTTENDGNLFKATLTIPYFEPQQTPHR*