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berkeley_reactor_200306_planktonic_scaffold_176984_266

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(287953..288591)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQW5_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 44.5
  • Coverage: 211.0
  • Bit_score: 177
  • Evalue 7.20e-42
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 211.0
  • Bit_score: 177
  • Evalue 2.00e-42
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEV97864.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.5
  • Coverage: 211.0
  • Bit_score: 177
  • Evalue 1.00e-41

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 639
ATGGATGTAAGGATAGCGATTACAGATGATCACCCGATGGTACGCGACGGACTGGCCGCAATGCTGCAGACCGTGGCCGGTATAACCGTAACGGCAAAGTATGCTTCCGGCAATGCTTTGCTGGCCGGGCTCAAGCTTGATGTACCCGATGTGCTGCTGCTCGATATGCACCTGCCTGATATGCATGGCCGCGAGATCGTAAAAACATTACGGAAGCAGTTCCCCGCCTTAAAAATAATCATCGTTACCAGTACCGAAAGTGTATTCCTCGTTAAAGCTATGCTGGACGCGGGCGCCAGGGCCTACCTGCTTAAAACGGCAGGGCAGGAGCAATTGTCAGATGCCATACGGCAGGTAATGGCGGGCGAGGTCGTACTCTCCCCGGAGGTGAAAGAACTGTTGCTGAAAAATGCTTTGAAGCAAAAAAGTAACCTGGCCTATAACGAGGAGCTGACGGAACGAGAGATCCGCATCCTGGAACTGATCGCCGAAGAGCTGACCAGCCCGGAAATAGCCGGGCAACTGCACCTGAGCCAACGTACGATCGAAAACTACCGCCTGGGCCTGATGCAGAAACTGGGCGCCAAAAATATGGCCGGCCTGGTAAAGAAGGCCATCCTGATGGGCATCATAAAATAA
PROTEIN sequence
Length: 213
MDVRIAITDDHPMVRDGLAAMLQTVAGITVTAKYASGNALLAGLKLDVPDVLLLDMHLPDMHGREIVKTLRKQFPALKIIIVTSTESVFLVKAMLDAGARAYLLKTAGQEQLSDAIRQVMAGEVVLSPEVKELLLKNALKQKSNLAYNEELTEREIRILELIAEELTSPEIAGQLHLSQRTIENYRLGLMQKLGAKNMAGLVKKAILMGIIK*