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berkeley_reactor_200306_planktonic_scaffold_176984_286

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 314234..315043

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZT3_DYAFD similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 268.0
  • Bit_score: 319
  • Evalue 2.50e-84
DNA-binding protein {ECO:0000313|EMBL:KEQ29044.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 267.0
  • Bit_score: 325
  • Evalue 5.00e-86
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 268.0
  • Bit_score: 319
  • Evalue 7.20e-85

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Taxonomy

Pedobacter antarcticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 810
ATGACCGGAACAAAATTTTTTTTTCCCAGTAATATCCGTTTTCTCCGGGAACGGAAACGGTTCAGCCAGGATGACCTGGCTCAACTTATTGATATTTCAAGGGTTAAACTCCAGGCTTTGGAATCCGGCAGAACCAAAAATCCATCGGCTACCGACCTGGTAAAATTTTCAGAATACTTCCGGATCAGTATCGATGCCCTGCTGAAGATCAACCTCGTCATGCTGGGTGAATTGAAGGTCCGGGAACTGGAGGCGGGTAATGATGTATATATGAGCGGTGGCAAACTGCGGGTATTGGCCATTACGGTTGATAAAAACAATAAAGAGAACCTGGAATATATACCCCTGAAAGCCAAAGCAGGCTATACCCGCGGATATAACGATCTGCAATACCTAGCCGGCCTGCCCAGGTTCAGCCTGCCCAACCTGCCCAAAGGCACTTTCAGAATGTTTCCCACTACGGGAGATTCCATGTTACCCTTTCCCGAAGGCTGCGATATTATAGGCCGTTACCTGGAAGACTGGAAAAACATAAAACCCCGAACGCCCTGTATCGTCATCCTGAACGGCGTCCAGGATATCGTATTCAAACTGGTTACGATTGGCGCCGACAACCATATCACCCTGGAATCCTTAAATACCGGCTACAAACCCTATACCGTAGCAGCGGCCGATGTGCTGGAACTATGGCAGTTTCACAGCTATCATACCCGGGCAATGCCCGAACCCCAGGCCGACCTGCAACATATCGCAGGGAGCATTAAGACCATACTAACGGAAATACAGGCCCTGAAAAGCGCGAAAAGATAA
PROTEIN sequence
Length: 270
MTGTKFFFPSNIRFLRERKRFSQDDLAQLIDISRVKLQALESGRTKNPSATDLVKFSEYFRISIDALLKINLVMLGELKVRELEAGNDVYMSGGKLRVLAITVDKNNKENLEYIPLKAKAGYTRGYNDLQYLAGLPRFSLPNLPKGTFRMFPTTGDSMLPFPEGCDIIGRYLEDWKNIKPRTPCIVILNGVQDIVFKLVTIGADNHITLESLNTGYKPYTVAAADVLELWQFHSYHTRAMPEPQADLQHIAGSIKTILTEIQALKSAKR*