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berkeley_reactor_200306_planktonic_scaffold_176984_294

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(323382..324206)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix, AraC domain-containing protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y332_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 267.0
  • Bit_score: 416
  • Evalue 1.60e-113
Helix-turn-helix, AraC domain-containing protein {ECO:0000313|EMBL:EHQ28850.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 267.0
  • Bit_score: 416
  • Evalue 2.20e-113
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 268.0
  • Bit_score: 411
  • Evalue 1.40e-112

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Taxonomy

Mucilaginibacter paludis → Mucilaginibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 825
ATGACTAACCCGACAGCAATCATTCCCGGTGTTCTTTTTTATGCCTATCTCTCGGCCATGCGCAAAGAGAAGGTGGGCTTCCTGCAGCATAGTACACTGGTGTTGCAGGTATCGGGGCAGTTTACGCTGGAGACTTCGGGTCAGAAGATCTCGATGAAAAAGGGGGAGATGTTGCTGATCGGTAAAAACCAGTTGGGACAAATCACCAAAGGACCATTGCCCGGCGAAGATTACGAAACGATTGTGATTACGCTGCAGGAAGACCTGCTGCGGAAGATCGCCCTGGAGGAAGGGATAACGGCACAGGAGCCCTATGCCGGGCCGCCTAATATCCTCATCCCGGTAAACGATTTTTTAAAAGGGTATTTTCAATCTATCATTCCTTATGTGCGTAACCCTTCGGAAGCGCTTACAGAAGCGATGGGTATCCTGAAGATCAAGGAAGGTGTAAAGTTGTTGTTGCATGTGATGCCCCAGCTCCGTAACCTGTTGTTCGATTTTTCCGAACCCTACAAGATCGACCTGGAGCGGTTTATGCTGAGCAATTTTCATTTTAATATCCCGCTGGAAAAATTTGCACACCTTACCGGGCGGAGCCTGGCGGGTTTTAAACGTGATTTTCAGCGTATATTCGGAATGGCGCCGCGGCATTGGCTACAGGAGCGGCGACTGACTGAAGCCTGTTACCTGATCGGGGAAAAAAACAAGAAACCTGCAGCCATCTATCTCGATCTCGGCTTCGAAAGCCTGGCGCACTTTTCCCGCGCTTTTAAGAAGCGGTTTGGCAAAAGTCCTACGGCATGGGCGCCGGGTGCAACGGCCTGA
PROTEIN sequence
Length: 275
MTNPTAIIPGVLFYAYLSAMRKEKVGFLQHSTLVLQVSGQFTLETSGQKISMKKGEMLLIGKNQLGQITKGPLPGEDYETIVITLQEDLLRKIALEEGITAQEPYAGPPNILIPVNDFLKGYFQSIIPYVRNPSEALTEAMGILKIKEGVKLLLHVMPQLRNLLFDFSEPYKIDLERFMLSNFHFNIPLEKFAHLTGRSLAGFKRDFQRIFGMAPRHWLQERRLTEACYLIGEKNKKPAAIYLDLGFESLAHFSRAFKKRFGKSPTAWAPGATA*