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berkeley_reactor_200306_planktonic_scaffold_4894_27

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(23303..24196)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5Y6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 40.5
  • Coverage: 294.0
  • Bit_score: 204
  • Evalue 1.30e-49
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDY18189.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.5
  • Coverage: 294.0
  • Bit_score: 204
  • Evalue 1.80e-49
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 35.9
  • Coverage: 276.0
  • Bit_score: 166
  • Evalue 1.10e-38

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 894
ATGCCCGCTCCCGAGCCCCTGTACTACAGCCGGCAGGTTTCCGCGGCCCGGCGATTTCACCTGCCGCCGGGGCGCTCCGATACCCCGCTGGTCGTCGCGGGGGCGGGGTGGGAGGCATGCCGGGCGGACTACGAGGTCCGCCGCACCAGCTTCTCGCATCTCACGGTGGAATTTGTCGCCAAGGGCGAGGGCGAGGCGGAGCTCGCCGGGGTGCGCTTCCCCCTGCGACCGGGGGTGATTTATGTCTACGACCGCACGGTGCCGCACCGGATCACGGCGGGAGAGGGTGGGATGGTGAAATACTTTGCCCTGCTGCGCGGTCCCGCCGCCCGCAAGCTCCTCGCCCGGCGCGGGCTGAGGCTTGGCGGGATGTGTGCGGTGACGCGGCCTGATCGCATTCGTGAGGTCTGGGACGATCTGGTCGAAATGGGCTTCGGCGACCGGTCGGATCGCGAGGAGGCATGTGCAGATACTTTGCGATACTTGATCCTCAAGATTGGCGACCTGATGACGCCCGAGGGGGAGAGCGCCTCGCTCGCCTATGCCACCTATCAACGCTGTCGCGAGACGATGGAGGAGCGCTATGCGGAGTTGGTCACGGTGAGTGATGTAGCCCGGGTGTGCGGCATCGACCCAGCGTACATGTGCCGATTGTTCCTTCGCTTCGGGCGGCAGAACCCATATCGCTACCTGCTCTGGCTGAGAGTAAATCACGCCGTCGATCTGCTGCGTCACACGGCGAAAACCGCCCGGCAGGTCGCGGAGGAGCTGAACTTCAGCGACGCATCCACCTTTTCCCGTACAGTGAAGCGCGTCTTTGGTCTCTCACCCTCGCGTTTGGGGCGTATGCAGCCCGATGCCCGGAAAGGTGAAGATTCTTCCTCGCATGAGTAG
PROTEIN sequence
Length: 298
MPAPEPLYYSRQVSAARRFHLPPGRSDTPLVVAGAGWEACRADYEVRRTSFSHLTVEFVAKGEGEAELAGVRFPLRPGVIYVYDRTVPHRITAGEGGMVKYFALLRGPAARKLLARRGLRLGGMCAVTRPDRIREVWDDLVEMGFGDRSDREEACADTLRYLILKIGDLMTPEGESASLAYATYQRCRETMEERYAELVTVSDVARVCGIDPAYMCRLFLRFGRQNPYRYLLWLRVNHAVDLLRHTAKTARQVAEELNFSDASTFSRTVKRVFGLSPSRLGRMQPDARKGEDSSSHE*