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berkeley_reactor_200306_planktonic_scaffold_4894_28

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 24302..26074

Top 3 Functional Annotations

Value Algorithm Source
L-fucose isomerase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I4U2_CALAS similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 584.0
  • Bit_score: 916
  • Evalue 1.00e-263
fucI; L-fucose isomerase similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 584.0
  • Bit_score: 916
  • Evalue 2.90e-264
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 584.0
  • Bit_score: 927
  • Evalue 8.20e-267

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Taxonomy

RBG_19FT_COMBO_Chloroflexi_55_16_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1773
ATGTCTACTCCCTCCCATCCCAAGGTCGGCATTCGCCCCACCATCGACGGCCGTCTCGGCGGCGTCCGCGAGTCCCTCGAGGACCAGACGCGCCTCATGGCGGAAGCCGCCGCCAAGCTCATCAGCTCCACCCTGCGCTACACCGACGGCACGCCCGTGGAATGTGTCCTGGCCGATACCTGCATCGGCGGCGTGGCCGAGGCCTCGGCCTGCGCGGAGAAGTTTGCCCGCGAGGGCGTGAAGGTCTCGCTCACCGTGACGCCCTGCTGGTGTTACGGCTCGGAGACGATGGACATGGACCCACTCATCCCGAAAGCCGTGTGGGGTTTCAACGGCACCGAGCGCCCTGGCGCGGTCTACCTCGCCGCCGTGCTCGCCGGTCATTCGCAGAAGGGCCTGCCCGCCTTTGGCATCTATGGCCGTGAGGTGCAGGATGGCGGCGACAGCAGCATCCCGGCGGATGTCGCGGGGAAGATTTTGCAATTCGTGCGCGCCGGTCTGGCCGTGGCTCAGATGCGCGGGCGTTCCTACCTGGGAATCGGCGGCGTTTCCATGGGCATCGCGGGCTCGATCGTTGATCAGCCCTTCTTTGAGAAATACCTCGGCATGCGCGTCGAGACCATCGACTCGACGGAGATCCTCCGCCGCATCGACAAGGGCATCTACGACGAGGCCGAGTACGAAAAGGCTCTCGCCTGGGTGAAGGCCAACTGTCCGGAGGGCAAGGATTACAACTCGCCGTCCACCACCCGCTCGCGCGAGCAGCTCGATCAGGAATGGGAGACCAGCGTGAAGATGGCCCTCATCTCCCGCGACCTCATGGTCGGCAACCCGAAGCTGGCTGAGAAGGGTTTCCGCGAGGAGGCTCACGGCCACCACGCCATCGCGGCGGGCTTCCAGGGCCAGCGCCAGTGGACGGATTACCAGCCGAACGGCGACTTCCTCGAGGCCATCCTCAACACGTCCTTTGACTGGAACGGCAAGCGTGCCCCGTACATCGTGGCGACAGAGAACGACTGCCTCAATGGCGCGTCGATGCTCTTCGGCCACCTGCTGACGAACACGGCGCAGATCTTCGCCGACGTGCGCACCTACTGGAGCGCGGACGCCGTGAAGCGCGTCACCGGCCACACCCTCGCAGGCGATGCGAAGAACGGCATCCTGCACCTCATCAACTCCGGTCCCGCCGCCCTCGATGGCACGGGCGAGCAGCAAATCGACGGCCAGCCCGCGATGAAGCCCTTCTGGGAAATCTCGCAGGAGGAAGTCGACGCCTGCCTGAAGGCCACGACCTGGCATCCCTCCATCACCGAGTATTTCCCCGGCGGCGGATGGTCCACCCGCTTCCGCACCCGCGGCGGCATGCCGACCACGATGTTCCGCCTCAATCTCATCGCCGGTCTCGGCCCCGCCCTGCAAATCGCGGAGGGCGTGACGGTCGACCTGCCGGACGACGTGCACTCCATCCTCGACGAACGCACGAACCCGACGTGGCCCACCACGTGGTTCGCCCCGCGCCTCACAGGCGAGGGTGCGTTCAGCGACGTCTACAGCGTGATGAACGCCTGGGGAGCCAACCATGGTGCCATCGCCTATGGACACATCGGCAGCGACCTCATTAGTCTCGCCGCCATGCTCCGCATCCCCGTCTACATGCACAACGTCTCGCGCGAGCGCGTTTTCCGTCCCAGCACGTGGAACGCCTTCGGCACCGCAGACCTCGAGGCGGCGGACTTCCGAGCCTGCCAGAACTTTGGCCCTCTTTATGCCTGA
PROTEIN sequence
Length: 591
MSTPSHPKVGIRPTIDGRLGGVRESLEDQTRLMAEAAAKLISSTLRYTDGTPVECVLADTCIGGVAEASACAEKFAREGVKVSLTVTPCWCYGSETMDMDPLIPKAVWGFNGTERPGAVYLAAVLAGHSQKGLPAFGIYGREVQDGGDSSIPADVAGKILQFVRAGLAVAQMRGRSYLGIGGVSMGIAGSIVDQPFFEKYLGMRVETIDSTEILRRIDKGIYDEAEYEKALAWVKANCPEGKDYNSPSTTRSREQLDQEWETSVKMALISRDLMVGNPKLAEKGFREEAHGHHAIAAGFQGQRQWTDYQPNGDFLEAILNTSFDWNGKRAPYIVATENDCLNGASMLFGHLLTNTAQIFADVRTYWSADAVKRVTGHTLAGDAKNGILHLINSGPAALDGTGEQQIDGQPAMKPFWEISQEEVDACLKATTWHPSITEYFPGGGWSTRFRTRGGMPTTMFRLNLIAGLGPALQIAEGVTVDLPDDVHSILDERTNPTWPTTWFAPRLTGEGAFSDVYSVMNAWGANHGAIAYGHIGSDLISLAAMLRIPVYMHNVSRERVFRPSTWNAFGTADLEAADFRACQNFGPLYA*