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berkeley_reactor_200306_planktonic_scaffold_4894_31

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(27391..28044)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator id=14424498 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP similarity UNIREF
DB: UNIREF100
  • Identity: 40.0
  • Coverage: 195.0
  • Bit_score: 128
  • Evalue 6.70e-27
acrR; TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.3
  • Coverage: 191.0
  • Bit_score: 120
  • Evalue 3.00e-25
Tax=CSP1_2_Dadabacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 40.0
  • Coverage: 195.0
  • Bit_score: 128
  • Evalue 9.40e-27

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Taxonomy

CSP1_2_Dadabacteria → Dadabacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGCTCGTGATGGAGAGCGTACTTAACAATCCTCCCCATCCGCTGCTTCGTACGCGTGATCGCATTTTGGGCGCAGCGAAGGAACTATTTGCCAGCAAGGGATTTAAAGGAACTACGACGGCGGAGATTGCCCGTCGCGCCGGAGTCAATGAGGCTTTGATCTACCGGCATTTCCCGGCCAAGCGCGACCTGCACACCGCCATCCTACGAGCCAAGCTCGAGGAGGAGGTCTCGCTGGAGCTTTTTCAGGCGCCGGAGTCGATCGACCTCCCCGTGGAAATCGTGCTCCAAGGCGTGGCTCAACGATTTCTCGAGGCCCACGACCCTACCTTTCTCAGGCTTTATTACCAGAGCGCCCTGGAGGGGCATGAGCTGGCGGGGGAGTTTTACGAGCAGTTTGTCACACGGTTTGTCGCAGTGCTGGAGGGAATGTTCATTCGCTGGATGGCCGCAGGTCTGATCCATGCGAGCAATCCACGCATGAGCGCTCAAGCGTTTCTCGGCATGTTGCGTAGCGCGGCGTTGAGCATTGAACTGTTTCAGGATCCGGATTTCCTCCGCCCCTACGACGAACTGGCCAGGGACTTCACCACGACCTTTATCAATGGGATCCGGGTGTATCCGGTCCATAGCGATCACAATCCCACGATCTAG
PROTEIN sequence
Length: 218
MLVMESVLNNPPHPLLRTRDRILGAAKELFASKGFKGTTTAEIARRAGVNEALIYRHFPAKRDLHTAILRAKLEEEVSLELFQAPESIDLPVEIVLQGVAQRFLEAHDPTFLRLYYQSALEGHELAGEFYEQFVTRFVAVLEGMFIRWMAAGLIHASNPRMSAQAFLGMLRSAALSIELFQDPDFLRPYDELARDFTTTFINGIRVYPVHSDHNPTI*