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berkeley_reactor_200306_planktonic_scaffold_4894_37

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(32094..32726)

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase catalytic n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7U3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 138.0
  • Bit_score: 174
  • Evalue 1.00e-40
Lytic transglycosylase catalytic {ECO:0000313|EMBL:EDY17466.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 138.0
  • Bit_score: 174
  • Evalue 1.40e-40
mltE; Soluble lytic murein transglycosylase similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 157.0
  • Bit_score: 132
  • Evalue 1.30e-28

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 633
GTGCGTGGTATCTTTGGAGGCGTGAAGGTTGTTGTCACGATATTGGCTGTCCTTGTGGTGCTGGCGGTTGCTGCGTTTGCAGTGATCAGCATGGCGAGCGACGACCCGCGCTATACCGCGCACGAGTTGCTGAGCCTCGGGCGGTATGACAAATACGACGACCTCATCCTCGAGGTCTCGAAGCAGCGCAACATCCCGCCCGAGCTGATCAAGGCGATCATCTGGAAGGAGAGCCGGTTTGACACCACGAAGAAAGGCAGCCAGGGCGAGCGCGGCCTCATGCAGATCACTGAGGTGGCTGCGGCGGATTGGGCCAAGGCGGGGAAGGTCGAGGGCTTTGTCCCGACGATGCTTTTCGATCCCAAGGTCAACATGGAGGTGGGCACGTGGTATCTGCGGCGCGCTCTGGATCACTGGTCCGAAAAGGATGACCCGGTGCCATTTGCGCTGGCCGAGTACAATGCCGGGCGGGGACGCGTGCATCGCTGGATGAAAGACTCCGGCCAGGGCTCCACGGCGGATGCCAAGGATTTGCAGGACGCGATGGATTTCCCCGGGACGAAGAGCTACATCGCGATGATCATCTCGCGGTCCGATTTCTACCGCAAACGCGGCGAGTTTACGGACCGGTAG
PROTEIN sequence
Length: 211
VRGIFGGVKVVVTILAVLVVLAVAAFAVISMASDDPRYTAHELLSLGRYDKYDDLILEVSKQRNIPPELIKAIIWKESRFDTTKKGSQGERGLMQITEVAAADWAKAGKVEGFVPTMLFDPKVNMEVGTWYLRRALDHWSEKDDPVPFALAEYNAGRGRVHRWMKDSGQGSTADAKDLQDAMDFPGTKSYIAMIISRSDFYRKRGEFTDR*