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berkeley_reactor_200306_planktonic_scaffold_59817_30

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(34433..36841)

Top 3 Functional Annotations

Value Algorithm Source
autotransporter, partial n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225A8CF similarity UNIREF
DB: UNIREF100
  • Identity: 31.0
  • Coverage: 934.0
  • Bit_score: 309
  • Evalue 6.00e-81
Uncharacterized protein {ECO:0000313|EMBL:KEO52528.1}; TaxID=1353532 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira permensis NBRC 106175.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.4
  • Coverage: 861.0
  • Bit_score: 330
  • Evalue 6.00e-87
autotransporter beta-domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 32.6
  • Coverage: 863.0
  • Bit_score: 276
  • Evalue 2.10e-71

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Taxonomy

Thalassospira permensis → Thalassospira → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2409
ATGAAAACCACCCGGCAGCTCTTTGTCGTTGCCATCTCGGGCCTGTGCGCCCTTGCTGGCAGGTCACTCCAGGCGCAACAAACCTCCTTTAGCGTAGGCACGGCGGCAGAGCTTGAGTCGGCGCTCCACCAGGTTTACCTGAACAACACGTCCAATCCCGCGCTGCAAAACACGATCACGCTCACGGCCAATATTTCGGCGACGAGCCAGATGGTGGTGAATGCGAATGTGATGATCGATGGCGGGTATTTCTCCATCGATATGAACAACTCCGACCGGGCGTTCTTCATTGCCGGTGGCGCGGTGTCCATCAGCAACCTGACGATCGCCAATGGCCGGGCCACGGGCGGCAACGGCAGCCTGGGCGGCGGCGGTGGTGCAGGGTTGGGCGGAGCGATCTTTGTCGGCAGCGGGTCGTACTATGGCGGGTCGGACTCGTCGGGCACGGGGGCGCTCGCCGCGCAGGGACTCAGCGCGCCGGCGGTGACGCTCAGCGGGGTGACATTCTCAAATAACAAGGCCGTGGGCGGATCGGTGGGATTCACCCTGGGCGACCAGTTTCTCAGCGGTGGCGGCGGCATGGGAGGCGACGCCTCCGGGGGGGGCGGCGATGGCGCGGGCGGCGGTGGCGGCGGATTTGGCAATGGCGCCAACGGCGCGGGCGGCACGGGGAACAACGGATCGGCGGGAGCCTTTGTCAATGTCAGCGCGGTCAATAGCACGAGCCTCTCGGCCGGAGGAGGCGGCAGCGGCGGAGATGGTAACGGGGGCTCCGGTGGCGCGGATGGCGGCGGAGGCGGAGGAGGCGGCAGCCCGAGTCTTACCTACCCCGGGACGGGCGGAGGCGGCGGTGTGGCTGGAGGCTACGGGCACTATGCCAATGACAATCCGCCAAACAGCGGCGGCAATGGCGGCTTCGGCGGCGGCGGCGGCTCCGGTGCGGGATCGTATAGCGAATCGGGTGGCAATGGCGGTTTCGGCGGAGGCGGCGGCGCATCGTCCCAGAGCGGCGGCGATGGCGGCTTCGGTGGAGGCGGTGGAGCGTACTCCACAGGGTCTGCAGGCGTGGGCGGCTTTGGCGCGGCGAGCGCGACGTCGAGCGGCGACACGGGCCTTAATAGCTCGGGCGGCGGCGGCCTCGGCGCGGGTGGTGCGATCTTTGTCATGGGCGGAGCGACCATCACCGTGCAGGACGGCGGATTCTCCGGCAACACGGTGGCGGGGGGAGTCAGCTCGGGCAATGGCAACAACGGCTCGGCCTACGGCGCGGATCTCTTCCTCGGCGGAAATGCGACCTTCAACGTCTCGTCCACCCTCAATGTCACGGCCCTCGGCGGAGCAGGCAATCTCAGCGATGCCAATGTCTCGAAGAACGCCGACGACGCCAACGCCCAGGGCGGCGTGATCAAGACCGGCGCGGGAAATCTCGTCATGAACGGGGACAACTACTACTCCGGCGTGACGACGATCAACTCCGGCACGGTCACTCTGGCCGCCGGGGCGGTCGAGAGAGGCACCAGCGTGGTGACGGTGGGGCAGGGCTCCGGCGATAACGCGACCCTGGCCCTGGGCAGCAGTTCCCTGCTTGCGCTCAAGGGCTTCAGCAACAGCGATCCGCAGGCCTCCACGGATGCCGCGGTGCAGGTCGCGCAGGCGGCCGGCTCGACGGGCCAGATCGTGATCGGGGCGGGAGCCGGGACGAGCGGTGCGGATATCGGAGCGCGGGTCTTCAATGGCGGCGCGGGCACGGCATCCCTCACCTTCCAGCAAAACTTCGCGGCGGGGTCCTCCTCCAACACGATCTACGAGTTTTACACCACGCTCACCGGGAGCATGAACCTCGTGCAGAGCGGACCCGGCACCACGGTGCTCAATCCCCTCTATGGTGCGAATACGATGACCGGCGATGTCTCGATCACCGGCGGCACGCTCGCCACGGCGGGCAGCGTGGCGTCGCTCGGCTCGGTGGGCCAGATCACGATCGATGGCGGCAATCTCCAGCTCGGCCAGTCGGAGGGTATTGCCAACTCCGCAGCGCTGAACCAGGGCAGCGGCCGGGTCGTCATCGGTGCGAGCGCCATCCAGGAGACGATGGGCGCGTGGGTGGTGTCGGATGCGGCGGTGGTGGATTTTAGCAACTTCGCCGCCGGGTTGACCTTTGCCTCGCTGGAGATCGACGGCACGCTGGCGATCTACAATTACAAGGGAGCCTCGACCACTCTCACCATCCTGAGCGGCTCGGCGGTGGGCGATCTCTCGCAGGTCGCCTTTTACTCCGACGAGGGCTCGACCTACCTCGGCTCCGGCGAGATCGTCGGCACGTCGCTCCAGGTCGTGCCCGAGCCGGCGACGTTTCTGCTCGTGGGCCTCGGCGTGACGGCGCTCTGGCTCCGCCGCCGCCGGGCGTAA
PROTEIN sequence
Length: 803
MKTTRQLFVVAISGLCALAGRSLQAQQTSFSVGTAAELESALHQVYLNNTSNPALQNTITLTANISATSQMVVNANVMIDGGYFSIDMNNSDRAFFIAGGAVSISNLTIANGRATGGNGSLGGGGGAGLGGAIFVGSGSYYGGSDSSGTGALAAQGLSAPAVTLSGVTFSNNKAVGGSVGFTLGDQFLSGGGGMGGDASGGGGDGAGGGGGGFGNGANGAGGTGNNGSAGAFVNVSAVNSTSLSAGGGGSGGDGNGGSGGADGGGGGGGGSPSLTYPGTGGGGGVAGGYGHYANDNPPNSGGNGGFGGGGGSGAGSYSESGGNGGFGGGGGASSQSGGDGGFGGGGGAYSTGSAGVGGFGAASATSSGDTGLNSSGGGGLGAGGAIFVMGGATITVQDGGFSGNTVAGGVSSGNGNNGSAYGADLFLGGNATFNVSSTLNVTALGGAGNLSDANVSKNADDANAQGGVIKTGAGNLVMNGDNYYSGVTTINSGTVTLAAGAVERGTSVVTVGQGSGDNATLALGSSSLLALKGFSNSDPQASTDAAVQVAQAAGSTGQIVIGAGAGTSGADIGARVFNGGAGTASLTFQQNFAAGSSSNTIYEFYTTLTGSMNLVQSGPGTTVLNPLYGANTMTGDVSITGGTLATAGSVASLGSVGQITIDGGNLQLGQSEGIANSAALNQGSGRVVIGASAIQETMGAWVVSDAAVVDFSNFAAGLTFASLEIDGTLAIYNYKGASTTLTILSGSAVGDLSQVAFYSDEGSTYLGSGEIVGTSLQVVPEPATFLLVGLGVTALWLRRRRA*