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berkeley_reactor_200306_planktonic_scaffold_59817_31

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 37009..37599

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Salinispora arenicola RepID=UPI000367C8DF similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 192.0
  • Bit_score: 230
  • Evalue 1.10e-57
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 192.0
  • Bit_score: 229
  • Evalue 4.20e-58
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 196.0
  • Bit_score: 236
  • Evalue 1.70e-59

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGAAGCCGACATCCACGCGCGACCGGATCATCGAGGAGGCCGACCGGCTTTTCTATGAACGCGGCTACGAGCACACCGCCTTTGCCGACATCGCGGAGGCGGTGGGCATCTCGCGCGGCAATGTGACGTTTCACTATCAGACGAAGGACGCCATACTCGACGCCGTGATCGACCGGAGGCTCGCACACACCGCCTCGCTACTGGAGCGGTGGGAGACGGGAGGCGATGGCCCGGCGGACCGCATCAAGAGCTTCATCGACATCCTCATCGCGAATCGCGCAAAAATCATGCTCCACGGCTGCCCGGTCGGCACGCTCTGCGCGGAGCTCGCCAAGCTGGAACACGATGCGCTCAGCCACGCCAGCGCGCTCTTTACGCTCTTCAAGGGCTGGCTCGCCACGCAGTTCGCCTCCCTCGGGTTGAAGAAAGAGGCCGACGCTCTCGCCCTCCATCTCCTCGCCCGCAGCCAGGGCATCGCCACGCTGGCCAGCGCTCTTCGCGACGAGGCCTTCCTCCGCGCGGAGGTGCGCCTCCTGCACGCGTGGCTGGACGATATCGCCCCTCCCTCGCCGCGCCGGAGACGCGCCTGA
PROTEIN sequence
Length: 197
MKPTSTRDRIIEEADRLFYERGYEHTAFADIAEAVGISRGNVTFHYQTKDAILDAVIDRRLAHTASLLERWETGGDGPADRIKSFIDILIANRAKIMLHGCPVGTLCAELAKLEHDALSHASALFTLFKGWLATQFASLGLKKEADALALHLLARSQGIATLASALRDEAFLRAEVRLLHAWLDDIAPPSPRRRRA*