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berkeley_reactor_200306_planktonic_scaffold_59817_59

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 58850..61507

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|RuleBase:RU000617};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.2
  • Coverage: 890.0
  • Bit_score: 962
  • Evalue 3.40e-277
ATP-dependent DNA ligase I (EC:6.5.1.1) similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 500.0
  • Bit_score: 416
  • Evalue 1.10e-113
DNA ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D409_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 57.2
  • Coverage: 890.0
  • Bit_score: 962
  • Evalue 2.50e-277

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2658
ATGGTCGCCATCGAATATCGCAAAGGGCTGCATCTGCCTGATGCCGATCTATGGCTCGATCCCTGGATTCCGCGCGAGCGCGCTTTTGTTTCCCACGCTCACAGCGACCATACCGGCCGGCACCGCCATCTCATCTGCACCGCCCCCACCGCCCGCCTGATGCAGGCCCGCATGGGCGGCGACATCGGGCAGTTGGATATCCTGCCGTTCGGCGAACGTCGCGTCTTCGGCTCCTGGGCGGGAACGCTCTTCCCCGCCGGCCACGTGCTCGGCTCGGCCCAGCTTCTCTACGAGGACGACAAGGGGTCCCTGCTCTACACGGGAGATTTCAAGCTCCGCAAGGGTCTTTCCGCGGAGGTCTTTCAGGCCCCGCGGGCCGATACCCTGGTGATGGAGACCACCTACGGCCTCCCGCATTACGTCTTTCCGCCTGCCGAGGCGGTCATCGCCGATGTGCTGAAGTTCTGCACCGAAACGCTGGAGGATGGCGAGACGCCCGTCCTCCTGGGTTACGCCCTCGGCAAGGCCCAGGAAATCCTCTCCGCCCTGCACAGCGCCGGGCTGCCCATCATGCTGCACGGCTCAGTCTATACCATCGCGCAGGTTTACGAGGAGTTTGGCGTCACCTTTCCCGCTTACGAAAAGTACGACCCGGAGAAGCTCTCCGGCCATGTCCTGATCTGCCCGCCGAGTGCGAACGGCTCGCGCCTGCTCACGCGCATCAAGAAACGCCGCGTGGCCGTGCTCACGGGCTGGGCTCTCGATCCCGCTGCGCGCTACCGCCTCCAGGTCGATGCAGCCTTTCCGCTTTCCGACCACGCGGGGTACGACGACCTGGTGCAGCTCGTGGAAACTGTCCAGCCGCGCCGCGTGCTCACGCTGCATGGCTTTGCGCAGGAGTTTGCCCGCGACCTCCGCGCCCGCGGCATCGATGCCTGGGCGCTCACAGGGGCGAACCAGTTGGAGTTTTCCATCGTGGAATCCCGGCGGCGCAAGAGTCCCGAGGCCGTCCCCTTGCGCGACCGCCCGGCGCATGGCTTCGAGCGCTTTTGCTCCGTCTGCGAAAGAATCCGCCAGTCCACGGGCAAGCTCCGCAAGGTGCGCTTCCTCGCCACCTATCTCCGCGCCCTGCCTGCGGAGGAGCTCCCCCACGCCGCGACGTGGCTGACCGGGCGGGCCTTCCCTCCGCACGAGGAAAAGGCGATCAACGTCGGCTGGTCGATCATCCACCGTGCGCTCGGCGCCGCCAGCCAGCTTTCCATGGCCGAGCTGCGCACCATCTCGCGCCGCCACAATGACGCCGGACTCACCGCCACCGAGGCCCTGGCCCATCACCCCGGCGAGGGAAATCCCGCCATCGGCGAAATCCACAGCCTGCTCGGCGACCTGCGCGCCGCCCGCGGGCCGATCGCCAAGACAGAGATCCTCACCGAGGCCTTTCGGCGCATGCCGCCCATCATGGGAGGCTATCTGGTGCGCATCCTCACCGGCGACCTCCGCATCGGGCTGAAGGAAGGGCTGGTTGAGGAAGCGGTCGCCATGGCCTTTGAGGTCGATGCCACCGATGTGCGCGAGGCCGCCATGCTGCTCGGCGACATCGGCCGCGCCGCCACTCTCGCCAGCGAGAAACGGCTTGAGCAGGCGGAGCTGACCATCTTCCAGCCCATCAAATGCATGCTCGCCAGCCCCGAGCCGGATGCCGTCGCCATCTGGGACCGCCTCGGCGGCAGCGGCCGCGTCTGGCTGGAGGATAAGCTCGATGGCATCCGCGCGCAGATCCACGTCACCCCCGAGCGTGTCGAGATTTACACCCGCGACCTCAAGCGCATCACCGACACCTTTCCCGAGGTCGCCGCGGCGGCCGCCCGTCTGCGCCGCGAGGCTGTCTTCGATGGTGAGATCCTCGCCTGGGAAAATGGCACGCCGCTCAGCTTCTTCGAACTCCAGAAGCGCCTCGGCCGCCGCGAGGCCGATCTCTTCCTCGGCGGCGAGATTCCCGTCGCCTACATGATCTTCGACCTGCTCCAGCTCGACGGCAGATCGCTTTTGAAAAAACCGCTCACCGACCGTCGCAGTCTGCTCCAGCGCCTCCCGCTCACCGATGGCATCCTGGCCGCAGAGGTGCATACCGCACGCTCCGCCGACGAGATCGAGGAGACCTTCCGCGCCGCCCGCGCCCGCGGCAATGAAGGCCTCATGGCCAAGGACCCCACGAGCATCTACTCGCCCGGCCGACGGGGTCTCTCCTGGCTGAAGCTCAAGAAGGAATTTGCCACCCTCGACGTCATCGTCGTCGCCGTCGAGTACGGCCACGGGCGGCGCAGCAATGTCCTGAGCGATTACACCTTTGCCGTGCGCGACGAGGCCACCGGCCGTCTCCTGCCCATCGGCAAAGCCTACTCCGGCCTCACCGACACTGAGATCGAGGAGCTCACCGAGGTCTTTCTCACCCAGATGGTTTCTCGTACCGGCAACCGCCTGGAGGTCGATCCCCGCATCGTCATCGAGGTCGCTTTCGATGCCATCCAGCCGAGCGACCGCCACGCCAGCGGCCTCGCCCTGCGGTTTCCCCGCATCAAGCGCCTTCGCCCCGACAAGACCGTGGCAGATATCGACACCCTCGCCGCTGCCCGACGACTGGCCGGGTCGCCAGCGTAA
PROTEIN sequence
Length: 886
MVAIEYRKGLHLPDADLWLDPWIPRERAFVSHAHSDHTGRHRHLICTAPTARLMQARMGGDIGQLDILPFGERRVFGSWAGTLFPAGHVLGSAQLLYEDDKGSLLYTGDFKLRKGLSAEVFQAPRADTLVMETTYGLPHYVFPPAEAVIADVLKFCTETLEDGETPVLLGYALGKAQEILSALHSAGLPIMLHGSVYTIAQVYEEFGVTFPAYEKYDPEKLSGHVLICPPSANGSRLLTRIKKRRVAVLTGWALDPAARYRLQVDAAFPLSDHAGYDDLVQLVETVQPRRVLTLHGFAQEFARDLRARGIDAWALTGANQLEFSIVESRRRKSPEAVPLRDRPAHGFERFCSVCERIRQSTGKLRKVRFLATYLRALPAEELPHAATWLTGRAFPPHEEKAINVGWSIIHRALGAASQLSMAELRTISRRHNDAGLTATEALAHHPGEGNPAIGEIHSLLGDLRAARGPIAKTEILTEAFRRMPPIMGGYLVRILTGDLRIGLKEGLVEEAVAMAFEVDATDVREAAMLLGDIGRAATLASEKRLEQAELTIFQPIKCMLASPEPDAVAIWDRLGGSGRVWLEDKLDGIRAQIHVTPERVEIYTRDLKRITDTFPEVAAAAARLRREAVFDGEILAWENGTPLSFFELQKRLGRREADLFLGGEIPVAYMIFDLLQLDGRSLLKKPLTDRRSLLQRLPLTDGILAAEVHTARSADEIEETFRAARARGNEGLMAKDPTSIYSPGRRGLSWLKLKKEFATLDVIVVAVEYGHGRRSNVLSDYTFAVRDEATGRLLPIGKAYSGLTDTEIEELTEVFLTQMVSRTGNRLEVDPRIVIEVAFDAIQPSDRHASGLALRFPRIKRLRPDKTVADIDTLAAARRLAGSPA*