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berkeley_reactor_200306_planktonic_scaffold_59817_65

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(66396..67463)

Top 3 Functional Annotations

Value Algorithm Source
rfaD; ADP-L-glycero-D-manno-heptose-6-epimerase (EC:5.1.3.20) similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 337.0
  • Bit_score: 387
  • Evalue 2.20e-105
ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744954 similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 331.0
  • Bit_score: 417
  • Evalue 6.90e-114
Tax=CG_Verruco_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 329.0
  • Bit_score: 411
  • Evalue 1.20e-111

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Taxonomy

CG_Verruco_01 → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1068
ATGGCAGACCAAATGACCTCGACCCTGAAGTCTCAGAAACAAAAGAAGAAGGAGCTTTCTCTCCTGCACCCCAAGGCGCGCGTGCTCGTGACCGGCGCCGGCGGGTTCATCGGCAGCGCGATCGTTCATGCGCTCAATCAACGTGGCATCGAGCAGATCGTCGTGACGGATTTCCTCGGCGAAGACGAAAAGTGGCGCAATCTCGCCCCGCTCGCCTTTGAGGACTATGTCCCGGCAGACCGCTTCCTCGAGGGTATTACGAAAGACCCCGATTCCTTCGGCAAATTCTCCGCCTGCTTCCACCTGGGCGCGTGCTCATCGACGACGGTGACAGATTCCGCCTACGTGATGGACAACAACTTTGGCTACACCAAGGCGCTGTGCCGCTGGGCGCTGGCCTCGGGCACGCGGTTTGTCTACGCCTCGTCCGCCGCGACGTATGGGGACGGGAGCGCGGGGATGGACGATCGCACTGAGAACCTGCGCCCGTTTCGCCCGCTCAATCTCTACGGCTACTCGAAGCATCTCTTTGACCTCTGGGCGCAGCGCGAGGAACTCCTCTCGGAGATCGTCGGCATCAAGTACTTCAACGTCTTTGGTCCCAACGAATACCACAAGGGAGACATGCGCAGCCTCGTGTGCAAGGCCTACGAGCAGATCGTCGCGACGGGCAAGATCCGTCTCTTCAAGAGCTACAAGCCGGAGTTTGCCGATGGCTGCCAGATGCGTGATTTCGTTTACGTAAAGGATGCGGTGGCCATGACGCTGCACCTCGCGGAAAATGAGGAAGTCGGTGGGCTGTTCAACGTGGGAGCGGGAGTCGCCCGGACCTGGGTGGACCTCGCCAGCTCGCTCTTTTCCGCGCTCGGCCTCCCGCCGCAGATCGAGTTTATCGAGATGCCCGAGAGCATCCGGCACCAGTATCAATACTACACCTGCGCCGACATTTCGAAGGTGCGCGAGGCGGGGTTCTCCGCGCCGACGACCACGCTGGAGGATGCGGTACGGGATTACGCGGTGAATTACCTGAAACCCGGCAAGCGTCTCGGCGACGAGGCGGCGGGCTGA
PROTEIN sequence
Length: 356
MADQMTSTLKSQKQKKKELSLLHPKARVLVTGAGGFIGSAIVHALNQRGIEQIVVTDFLGEDEKWRNLAPLAFEDYVPADRFLEGITKDPDSFGKFSACFHLGACSSTTVTDSAYVMDNNFGYTKALCRWALASGTRFVYASSAATYGDGSAGMDDRTENLRPFRPLNLYGYSKHLFDLWAQREELLSEIVGIKYFNVFGPNEYHKGDMRSLVCKAYEQIVATGKIRLFKSYKPEFADGCQMRDFVYVKDAVAMTLHLAENEEVGGLFNVGAGVARTWVDLASSLFSALGLPPQIEFIEMPESIRHQYQYYTCADISKVREAGFSAPTTTLEDAVRDYAVNYLKPGKRLGDEAAG*