ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_59817_117

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(124696..125910)

Top 3 Functional Annotations

Value Algorithm Source
Putative transport transmembrane protein n=1 Tax=Ralstonia solanacearum SD54 RepID=V4ZXX2_RALSL similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 373.0
  • Bit_score: 283
  • Evalue 1.80e-73
putative Co/Zn/Cd efflux system membrane fusion protein similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 373.0
  • Bit_score: 283
  • Evalue 5.00e-74
Putative Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:AGH87573.1}; TaxID=1262456 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum FQY_4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.4
  • Coverage: 373.0
  • Bit_score: 283
  • Evalue 2.50e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ralstonia solanacearum → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1215
ATGAATACGCCCATCGATCGTCCTTTGCCCGAGCTCGGATACGCGAACACCCCGCACCCCGCTCCTCCCGGCAAATCCCGCGTTCCGACCCTGCTTCTGGCGGGAGGATTTGCGACCGTGCTCGGCCTCCTGCTTGTGCTTGGGATCAAGCCCCGCCTCGATAATGTCCACACCCTTGCCGCGGAAATGCCGACCACGGCGTTCCATGCGGTTATCCAAGAAGCGAAGCCCGCCGAGTCCGCGCTCGACATCACTCTACCGAGCCGGGTCGAGGCCGCGCAGCGTGCGCCGCTTTACTCCCGGGTGAGCGGATACGTGAAGGAACTGCACACCGATATCGGCAGTCACGTGAAGGCTGGAGATGTCCTGGCCGTCATCGAAACGCCGGAGCTCGATGAGCAGGTGAATCAAGGCCGCGCCGCGCTCGCCCAAGCTGCGGCCAACTTGAAACTCGCCCGGACGAGCTTTGACCGCTGGACGAAGCTTTCGAAGGAGAATGTCGTCGCTGCCCAGGAGCTGGATGAGCGCCGCGCAACGCTCGATGCCCGCGATGCGGATTATCAGGCGGCGCAGGCGAATCTCGACCGTCTTGAGCGGCAGCAGGAGTTTCAGAAGATTGTTGCGCCTTTCGACGGCACCGTGACGAAGCGCTTCATTGAGGTCGGCCAGTTGGTGACGGCCGACGTGAACGACACGAGCCGCCAGCTTTTTGAGCTCGCGCACACGGCGACACTCCGCGCCTTCATCGACGTTCCGCAGAGTTACTTCCGGCTGGTCGCAGTCGGGCAGGGGGCCGATTTGCGATTTCACGAACTCCCGGGCGAAACCTTCCCCGCCCGAGTCGTTCGCACGGCGGGAGCGCTCGACGATAACAGCCGCACGCTGCGCACCGAGGTGCTCGTTCCCAATCAGGATGGCAAACTGGTCCCCGGTTTGTACACCGAGGTAACGCTGCACGTGGAGCGTGCCCAGCCGCCGATCCGCATTGCGTCAAAGTCGCTCATCCTTGGCTCCGCTGGCGTACAGGTTGCGGTGCTCGGTGAGGGCAATCGTGTCGCGCTGCGCAAGGTGACGATCGACCGTGATCTCGGCGATCAGGTGGAAATCGTCTCCGGCCTGGCAGCGGGCGACCGCTTCGTGGCCAATCCCACCGACCGGCTCAAGGACGGCGAGACCGTGGAGGTCGAGCCAGTTCCCAAGGTGGCCGCGAAATAA
PROTEIN sequence
Length: 405
MNTPIDRPLPELGYANTPHPAPPGKSRVPTLLLAGGFATVLGLLLVLGIKPRLDNVHTLAAEMPTTAFHAVIQEAKPAESALDITLPSRVEAAQRAPLYSRVSGYVKELHTDIGSHVKAGDVLAVIETPELDEQVNQGRAALAQAAANLKLARTSFDRWTKLSKENVVAAQELDERRATLDARDADYQAAQANLDRLERQQEFQKIVAPFDGTVTKRFIEVGQLVTADVNDTSRQLFELAHTATLRAFIDVPQSYFRLVAVGQGADLRFHELPGETFPARVVRTAGALDDNSRTLRTEVLVPNQDGKLVPGLYTEVTLHVERAQPPIRIASKSLILGSAGVQVAVLGEGNRVALRKVTIDRDLGDQVEIVSGLAAGDRFVANPTDRLKDGETVEVEPVPKVAAK*