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berkeley_reactor_200306_planktonic_scaffold_59817

Search features with annotation key words

Displaying items 91-120 of 558 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_59817_91
unknown

Not on your lists

comp(92216..94657)
DNA (2442bp) protein (814aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_59817_92
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(94797..96311)
DNA (1515bp) protein (505aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Z76_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
berkeley_reactor_200306_planktonic_scaffold_59817_93
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(96422..97936)
DNA (1515bp) protein (505aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0N0_9BACT
berkeley_reactor_200306_planktonic_scaffold_59817_94
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(97933..99033)
DNA (1101bp) protein (367aa)
Peptidase M20 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0M7_9BACT
Peptidase M20 {ECO:0000313|EMBL:EDY19889.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
acetylornithine deacetylase
berkeley_reactor_200306_planktonic_scaffold_59817_95
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(99030..99980)
DNA (951bp) protein (317aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0M2_9BACT
epimerase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
berkeley_reactor_200306_planktonic_scaffold_59817_96
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(100037..102625)
DNA (2589bp) protein (863aa)
von Willebrand factor type A n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6B0_9BACT
von Willebrand factor type A {ECO:0000313|EMBL:EDY18019.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
von Willebrand factor type A
berkeley_reactor_200306_planktonic_scaffold_59817_97
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(102635..103666)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5B0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18315.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
putative transmembrane protein
berkeley_reactor_200306_planktonic_scaffold_59817_98
unknown

Not on your lists

comp(103758..104630)
DNA (873bp) protein (291aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_59817_99
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(104917..106005)
DNA (1089bp) protein (363aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Spermidine/putrescine transport system ATP-binding protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GEE0_SORC5
potA2; spermidine/putrescine transport system ATP-binding protein
berkeley_reactor_200306_planktonic_scaffold_59817_100
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106075..106971
DNA (897bp) protein (299aa)
Putative Glycosyl transferase family 2 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AM67_AZOBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIB11378.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
berkeley_reactor_200306_planktonic_scaffold_59817_101
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(106968..107318)
DNA (351bp) protein (117aa)
Ferredoxin, 2Fe-2S, putative n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CV75_9BACT
Ferredoxin, 2Fe-2S, putative {ECO:0000313|EMBL:EDY22463.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_59817_102
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(107315..109963)
DNA (2649bp) protein (883aa)
Adenylate/guanylate cyclase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVE4_9BACT
Adenylate/guanylate cyclase {ECO:0000313|EMBL:EDY21386.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Predicted ATPase
berkeley_reactor_200306_planktonic_scaffold_59817_103
Streptomyces sp. PAMC26508, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(110009..110788)
DNA (780bp) protein (260aa)
polyphosphate glucokinase (EC:2.7.1.63)
Polyphosphate glucokinase {ECO:0000313|EMBL:AGJ57035.1}; EC=2.7.1.63 {ECO:0000313|EMBL:AGJ57035.1};; TaxID=1265601 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PAMC26508.;"
Polyphosphate glucokinase n=1 Tax=Streptomyces sp. PAMC26508 RepID=M9U1U8_9ACTO
berkeley_reactor_200306_planktonic_scaffold_59817_104
Brevibacillus agri, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(110803..112278)
DNA (1476bp) protein (492aa)
Aldehyde dehydrogenase n=1 Tax=Brevibacillus agri BAB-2500 RepID=L5MWD1_9BACL
Aldehyde dehydrogenase {ECO:0000313|EMBL:ELK42118.1}; TaxID=1246477 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus agri BAB-2500.;"
betaine-aldehyde dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_59817_105
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112296..112502)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXW8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGI76628.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_59817_106
unknown

Not on your lists

112558..113064
DNA (507bp) protein (169aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_59817_107
unknown

Not on your lists

113089..113556
DNA (468bp) protein (156aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_59817_108
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(113548..114330)
DNA (783bp) protein (261aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
pfs; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (EC:3.2.2.9)
5''-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FG33_9CLOT
berkeley_reactor_200306_planktonic_scaffold_59817_109
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(114356..116359)
DNA (2004bp) protein (668aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
UvrD/REP helicase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU41_9BACT
UvrD/REP helicase
berkeley_reactor_200306_planktonic_scaffold_59817_110
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(116356..116943)
DNA (588bp) protein (196aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Phosphoribosylglycinamide formyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU39_9BACT
phosphoribosylglycinamide formyltransferase
berkeley_reactor_200306_planktonic_scaffold_59817_111
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

116977..117906
DNA (930bp) protein (310aa)
Polyprenyl synthetase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1D0_9BACT
Polyprenyl synthetase {ECO:0000313|EMBL:EDY19542.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
polyprenyl synthetase
berkeley_reactor_200306_planktonic_scaffold_59817_112
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(118019..118960)
DNA (942bp) protein (314aa)
Auxin Efflux Carrier n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSS4_OPITP
auxin efflux carrier
Auxin Efflux Carrier {ECO:0000313|EMBL:ACB74768.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
berkeley_reactor_200306_planktonic_scaffold_59817_113
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(118941..121382)
DNA (2442bp) protein (814aa)
Peptidase U32 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8D7_9BACT
Peptidase U32 {ECO:0000313|EMBL:EDY17330.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
peptidase U32
berkeley_reactor_200306_planktonic_scaffold_59817_114
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(121465..123489)
DNA (2025bp) protein (675aa)
Sulfate adenylyltransferase, large subunit {ECO:0000313|EMBL:EEF59180.1}; EC=2.7.1.25 {ECO:0000313|EMBL:EEF59180.1};; EC=2.7.7.4 {ECO:0000313|EMBL:EEF59180.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Sulfate adenylyltransferase, large subunit n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLS3_9BACT
sulfate adenylyltransferase large subunit
berkeley_reactor_200306_planktonic_scaffold_59817_115
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(123486..124322)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037876D3
cysH; sulfate adenylyltransferase subunit 2
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
berkeley_reactor_200306_planktonic_scaffold_59817_116
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

124375..124692
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZR9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20233.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_59817_117
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124696..125910)
DNA (1215bp) protein (405aa)
Putative transport transmembrane protein n=1 Tax=Ralstonia solanacearum SD54 RepID=V4ZXX2_RALSL
putative Co/Zn/Cd efflux system membrane fusion protein
Putative Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:AGH87573.1}; TaxID=1262456 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum FQY_4.;"
berkeley_reactor_200306_planktonic_scaffold_59817_118
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(125915..129118)
DNA (3204bp) protein (1068aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KUX1_PARAV
Uncharacterized protein {ECO:0000313|EMBL:CCB85036.1}; TaxID=765952 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae (strain UV7).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_59817_119
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

129220..129615
DNA (396bp) protein (132aa)
ArsR family transcriptional regulator n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746579
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:BAH78025.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
berkeley_reactor_200306_planktonic_scaffold_59817_120
Burkholderia sp. RPE64, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129645..130394)
DNA (750bp) protein (250aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Burkholderia sp. RPE64 RepID=R4X1V6_9BURK
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:BAN26351.1}; TaxID=758793 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE64.;"
Displaying items 91-120 of 558 in total

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