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berkeley_reactor_200306_planktonic_scaffold_59817

Search features with annotation key words

Displaying items 541-558 of 558 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_59817_539
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

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comp(609569..611494)
DNA (1926bp) protein (642aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU000675}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU000675};; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
Beta-galactosidase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZY57_OPITP
beta-galactosidase
berkeley_reactor_200306_planktonic_scaffold_59817_540
Mangrovibacter sp. MFB070, Mangrovibacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(611617..612732)
DNA (1116bp) protein (372aa)
L-iditol 2-dehydrogenase n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1J0D0_9BACT
Theronine dehydrogenase {ECO:0000313|EMBL:KEA51372.1}; TaxID=1224318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Mangrovibacter.;" source="Mangrovibacter sp. MFB070.;"
threonine dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_59817_541
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(612908..613759)
DNA (852bp) protein (284aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Formyltetrahydrofolate deformylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW71_9BACT
phosphoribosylglycinamide formyltransferase
berkeley_reactor_200306_planktonic_scaffold_59817_542
unknown

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comp(613760..614290)
DNA (531bp) protein (177aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_59817_543
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(614299..617079)
DNA (2781bp) protein (927aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU03_9BACT
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EDY22041.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_59817_544
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(617079..617492)
DNA (414bp) protein (138aa)
biopolymer transportern ExbD n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000379229D
exbD; biopolymer transport protein ExbD/TolR
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
berkeley_reactor_200306_planktonic_scaffold_59817_545
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(617489..618235)
DNA (747bp) protein (249aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU01_9BACT
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:EDY22039.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
MotA/TolQ/ExbB proton channel
berkeley_reactor_200306_planktonic_scaffold_59817_546
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

618496..619977
DNA (1482bp) protein (494aa)
Putative O-methyltransferase n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AYC2_9BACT
Putative O-methyltransferase {ECO:0000313|EMBL:EIQ00014.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_59817_547
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

619967..620962
DNA (996bp) protein (332aa)
Putative O-methyltransferase n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AYC2_9BACT
Putative O-methyltransferase {ECO:0000313|EMBL:EIQ00014.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
type II restriction modification system
berkeley_reactor_200306_planktonic_scaffold_59817_548
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

621097..622206
DNA (1110bp) protein (370aa)
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACT94052.1}; EC=5.1.1.1 {ECO:0000313|EMBL:ACT94052.1};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
LacI family transcription regulator n=1 Tax=Dyadobacter beijingensis RepID=UPI00035C6DF8
LacI family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_59817_549
unknown

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622249..622911
DNA (663bp) protein (221aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_59817_550
unknown

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623022..623846
DNA (825bp) protein (275aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_59817_551
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

623863..625410
DNA (1548bp) protein (516aa)
N-acetyl-beta-hexosaminidase n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AZU0_9BACT
N-acetyl-beta-hexosaminidase {ECO:0000313|EMBL:EIQ00532.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
glycoside hydrolase family 20
berkeley_reactor_200306_planktonic_scaffold_59817_552
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

625412..626104
DNA (693bp) protein (231aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IV56_9BACT
N-terminal cleavage protein
N-terminal cleavage protein {ECO:0000313|EMBL:AHF91456.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
berkeley_reactor_200306_planktonic_scaffold_59817_553
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

626101..627189
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0GVW0_STRA9
peptidoglycan hydrolase
Peptidoglycan hydrolase {ECO:0000313|EMBL:AIA07315.1}; TaxID=68570 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus.;"
berkeley_reactor_200306_planktonic_scaffold_59817_554
GWC2_Planctomycetes_45_44_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

627180..628631
DNA (1452bp) protein (484aa)
Major facilitator superfamily MFS_1 id=3498408 bin=GWC2_Planctomycetes_45_44 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
hypothetical protein
Tax=GWC2_Planctomycetes_45_44_curated
berkeley_reactor_200306_planktonic_scaffold_59817_555
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(628658..629227)
DNA (570bp) protein (190aa)
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DB26_9BACT
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
berkeley_reactor_200306_planktonic_scaffold_59817_556
Geobacillus kaustophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

629293..630720
DNA (1428bp) protein (476aa)
6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109, ECO:0000256|RuleBase:RU000485}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109, ECO:0000256|RuleBase:RU000485};; TaxID=235909 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus kaustophilus (strain HTA426).;"
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Geobacillus kaustophilus (strain HTA426) RepID=Q5KXF7_GEOKA
Displaying items 541-558 of 558 in total

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