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berkeley_reactor_200306_planktonic_scaffold_59817_544

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(617079..617492)

Top 3 Functional Annotations

Value Algorithm Source
biopolymer transportern ExbD n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000379229D similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 137.0
  • Bit_score: 162
  • Evalue 2.00e-37
exbD; biopolymer transport protein ExbD/TolR similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 137.0
  • Bit_score: 161
  • Evalue 1.30e-37
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 137.0
  • Bit_score: 190
  • Evalue 9.70e-46

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Taxonomy

RHI_Verrucumicrobia_41_10 → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 414
GTGAACTTTCGCTCCCATACCGCGCCCGAGCGCGTGGTGTTCCAGATTGCCCCGTTTGTGGACATTCTGCTGTTTCTCCTCGTGTTCTTCATCCTCACGTGGAACTTCGCCCGCAATGAGGCCGAGCTGGACGTAAAGGTGCCGGCCGCCCGCGAGGGCAAGGAAAACCGCCGTCCGGTTGGCGAGGTGATTCTCAACGTCCGGCGCGATGGTTCCATCGTGATGAACCGCCGCTCGATGACGCCCGCGGAGTTGCAGGAGACCCTGGCCCGCATCGCCCAGCTCTACCCGGATCAGGCCGTCGTCCTGCGGGGTGACCAGAATGTCGACTACAAGTATGTGGTCGACGTGCTGGACATCTGCCGCGCGGCCAATATCTGGAACGTGGCTTTTGCCACGAGCAAGCCGGATTGA
PROTEIN sequence
Length: 138
VNFRSHTAPERVVFQIAPFVDILLFLLVFFILTWNFARNEAELDVKVPAAREGKENRRPVGEVILNVRRDGSIVMNRRSMTPAELQETLARIAQLYPDQAVVLRGDQNVDYKYVVDVLDICRAANIWNVAFATSKPD*