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berkeley_reactor_200306_planktonic_scaffold_59817_543

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(614299..617079)

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU03_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 37.6
  • Coverage: 852.0
  • Bit_score: 536
  • Evalue 4.60e-149
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EDY22041.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.6
  • Coverage: 852.0
  • Bit_score: 536
  • Evalue 6.40e-149
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 26.9
  • Coverage: 797.0
  • Bit_score: 256
  • Evalue 2.00e-65

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2781
ATGAAAGGCTCGCTCACCCTTTCGCTGCTCAGCAGCGCAGCGTGCGTCTGTACGTTGATGGCACAGGAGCCCGAGGTGCGTCGTGCGATCCCGGTGATCCGGGGGGAACAGGGGTCTGATTTCGATTACCAGAATCCGACATGGATGAACCACGTCACGCCGACCCCGGCGCAGACCCCCACTCCCACTCCGGTGCCGGCACCGACCGTCGACCCACGAAACTTCGCACCGGAGCCGGGCTTCACGCCCTTTCGCCCGTCGGGTCGCGTGACCGTGAGCCCGACGCCAGACAGCGGATGGCAGCGCTTGCCCGCCGAGGAGCCCGCCGCCACCCCGGTGCGCGTGGCCACACCGATTCCCATCGACCGCCCCGCCCGGACTGCGACTCCCGCGCCCGTGGCCACGCCGATCCCGATCCGTCGCGCGGAACCCGTGCAGCGTCCCGCCGCGATCCCGACCGCCACACCCGCGGTGATTCCCACCGCCACCCCGGCGGCCGCCGTGGCTGTGCCGACGCCGGATGAGGACGGAATCATTCGCCTCTCTCCCACCGCACCCGCCGCCGACACGACGGCGGATGACCTGAATCGCGCCAATGCCGTCTACGCCCGCAAGATGTACGACTACGCGGTGGCGGAGTATGAAAAGTTTCTCATCGCCCACCCAACGGCGACCCAGCGCGACCAGGCGCTCTTTCGTCTCGGTGAAAGCCACCGGCTGCTCGGCAATGACGATTCCGCACGCGATGCCTATCAGCGCCTGGTGACGCAGTTCCAGACCGGCGAATTCGTCGGCGCGGGAGCATTCCGGCTCGGAGAGTATCTCTTCGGCGACCGCATGTACGAGCAGGCGCTCAAGCAGTTCCAGACCGCCTCCGAGCAGGCGACGAGCCCGGAGGTCAAACTCTCGGCCAAGTACCAGCAGGCCCGCTGCCTGGAGAAGCTCAAGCGTACAGACGACGCGGTGAGCGCGTACCAGGAAGTGGCCGACGTCACGAAGGACAATCCCTATCGCGACTACGCCCGGCTCTCCCTCGCCGAGGTGAATGCCAATGCCGGGAATAAAAAAGAGGCGCTAGAGGCATTTGCCAAGCTTGCCGCCGATCCCGGACCCTCCGCCATGCGCGCCGAGGCTGCGGTAAAAGCCGCTGCGATCGCCGCCGAACTGAGTGACCAGAAACGCGCCGCCTCGCTCTTCGACGCCGCGCTTGCGCTACCCGATCTGGGCGACTGGAAGGCGATCGCCGTGCTTGGCGCGATGCGCACATTTTATACGACGGGGAATTACCAGAAGGTGACCACGCTAAAGGACAAGTATCTCGACAGCCTGCCGGAGGACACCCGCGCCGAGGCGCTGCTGCTGGCGGCAAACTCCTATCGTCAGCTCGGCAATGCACAGTCTGCACAGACCGTATACAACCAGCTCATCACCCGATACCCCGAGGCGGCACAGGCGCAGGACGCCAGATTTCAGAAGCTGGTGAGCATGTACCAGCTCGAGGACCCGGCGCTGCTCACTGAGGTCGATAATTTCCTCCAGGTGAGCAAAGACCCGAAGCAGCGGGCGCAGGCCCAGTTGCTCAAGGCCGAGGCGCTTTTCAAAAAGCAGGACTACGCCGCCGCCGCCCCGCTGTACAATCAGGTGCTCGCCTCCAGCCTCGATGCCGACATCAAAGGCAAGGCGATGATGAAACTCGGATGGTGCCTGGGCAAGACGGGGCAGTTTTCCCCGGCAGCCCAGGTTTACACAAGCTACCTCCAGCAGTTCCCGAAAGGTTCTTCCGCGCTCAACGCAACCATCCAGCGAGGACTCGCCCTTCAGGAGCTGAAGGACTACCCGGGCGCGCTGAAAGACTTCAACTCCGTCATCGACAACAACAAGGAGGCCAAGGAGCGCGAACTCGCTCTCCAGCAAAAGGCGCTCATCGAGGGCCAGCAGCAGGATTACAAGGCGATGACCGCGACCTTCAAACAGCTCCTCGCGGAATATCCGAAGACCTCGGCAGCCGGGCAGGCGAATTTCTGGATCGGCTGGGCCGCGTATGAAAACAAGGATTACGCTGGAGCCATCCCAAGCCTGGATGCCGCACGCAGGCTCGATCCGCAGTACGCCGACCGCGCCACGCTACGGATCATTCTCTCCTACTACTACCAGCAGAATACCGACGCCCTGAAGCAGGCGCTGAAAGAGAATCCCAAGGTGCAGGTACCCGCCGAGATCAACCGCTGGCTGGGCCGCAAGAGCTTTGAGGAGGGTGACTACGCCACCGCCGAGCGCAATCTCCTGCCGGTCGTGACCGAGGGCAAGACGGCGGAACCTGACGCACTCATCGAGTTGGCGGAGGCACAGATCCGCCTCGGCAAAGCCAGCGCAGCATCGCCGCATGTGGCGAATTATCTCAAGGTCGCACGTGATCCCGCCAGCCGTGCACGAGGGTTGATCGCCCAAGGCCGGATCGCCCTCGCGGCAAAGCAATACGACGAGGCCCAGCGTCTCGACGAGGAGGCCCTGCTCCTGCAACCGGAAGGCTCCTACAATGCCGACGCCCGCATGCTCTCCGGCGAGATTTCCATGAGCAAGGGCGACTACGATGGCGCGGCCCGAGCCTTCCTGAGCCTGGCGGTGCTCTACAATGATCCCGCCGTCACCCCCCGCGCGCTTGAGCTCGCCGCCGAGGCTTACCGCAAGGCGGGCAATACCTTCGAAGCCGAGAAAGCCACGAAGGAATTGCGCGAACGCTTTCCTGATTTCAAAAAATCCTCCAAACTGACCAAGGAATGA
PROTEIN sequence
Length: 927
MKGSLTLSLLSSAACVCTLMAQEPEVRRAIPVIRGEQGSDFDYQNPTWMNHVTPTPAQTPTPTPVPAPTVDPRNFAPEPGFTPFRPSGRVTVSPTPDSGWQRLPAEEPAATPVRVATPIPIDRPARTATPAPVATPIPIRRAEPVQRPAAIPTATPAVIPTATPAAAVAVPTPDEDGIIRLSPTAPAADTTADDLNRANAVYARKMYDYAVAEYEKFLIAHPTATQRDQALFRLGESHRLLGNDDSARDAYQRLVTQFQTGEFVGAGAFRLGEYLFGDRMYEQALKQFQTASEQATSPEVKLSAKYQQARCLEKLKRTDDAVSAYQEVADVTKDNPYRDYARLSLAEVNANAGNKKEALEAFAKLAADPGPSAMRAEAAVKAAAIAAELSDQKRAASLFDAALALPDLGDWKAIAVLGAMRTFYTTGNYQKVTTLKDKYLDSLPEDTRAEALLLAANSYRQLGNAQSAQTVYNQLITRYPEAAQAQDARFQKLVSMYQLEDPALLTEVDNFLQVSKDPKQRAQAQLLKAEALFKKQDYAAAAPLYNQVLASSLDADIKGKAMMKLGWCLGKTGQFSPAAQVYTSYLQQFPKGSSALNATIQRGLALQELKDYPGALKDFNSVIDNNKEAKERELALQQKALIEGQQQDYKAMTATFKQLLAEYPKTSAAGQANFWIGWAAYENKDYAGAIPSLDAARRLDPQYADRATLRIILSYYYQQNTDALKQALKENPKVQVPAEINRWLGRKSFEEGDYATAERNLLPVVTEGKTAEPDALIELAEAQIRLGKASAASPHVANYLKVARDPASRARGLIAQGRIALAAKQYDEAQRLDEEALLLQPEGSYNADARMLSGEISMSKGDYDGAARAFLSLAVLYNDPAVTPRALELAAEAYRKAGNTFEAEKATKELRERFPDFKKSSKLTKE*