ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_59817_124

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(134996..135805)

Top 3 Functional Annotations

Value Algorithm Source
Cell shape-determining protein MreC n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4U1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 272.0
  • Bit_score: 272
  • Evalue 2.70e-70
mreC; Rod shape-determining protein mreC similarity KEGG
DB: KEGG
  • Identity: 33.0
  • Coverage: 276.0
  • Bit_score: 150
  • Evalue 4.40e-34
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 269.0
  • Bit_score: 282
  • Evalue 6.30e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_Verrucumicrobia_41_10 → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 810
ATGAATCGACTGCTTCTTGTTATCGTTTTCCTGATCGTGGCGGGAGCTGTGCTGCTCTCGACGCTTGGTTCCGATGCGATGCACAAGATGCAGTCCGGTTTCCTCGGCATCGTCGCTCCGTTTGTCAAAACCGGTTCCGCCGTGCAGCGGCAGATCGGTGAAATGGGCTCGGGATTGAAGAACCTCGATGAACTGGAGGCCGAGTACAACAGGCTCACGGTGGAAAACCGGGAACTGCGCACGGAGAATCAGCTGCTCCGTGACATCGAGGCCGAGAACAACAAGCTGCGCCAGGCGCTCGAGTATCGCGAGCGCTCGGTCTTCAAGCTGCTCCCGGCCCGGGTTATCTCGCGCGACGGGTCGACATGGTGGAGCACGATCAAGATCAACCGCGGCTTCGAGGATGGCGTCGAGGTGGACGAGCCTGTCTTGACTGATGCGGGCCTGGTCGGCAAGACGACCACGGTCGCAAAGAACGAGTCCATCGTCCTCCTCATCACCGACGAGACCTGCAAGGTCGCGGGCAAGGTGGAGGGGAGTCGGGAGCAGGGAATACTCTCGGGTGTGCGGGTGCAGCAGAGCGACACGCCCGGGCTGCTCCAGATGGATTTCCTTTCCAAGCAAGCCAACCTGCAGCCAGGCCAGAAGATTTACAGCGCCGGTGTCAGCAACGGCGTTTTCCCCTCGGGGATTCCCATCGGAGTCGTGAAAAGTTTCCAGGTGCGTGCGCTCGACGGGAGGGCTATCGTCGAACCCGCCGTGGATACTTCGATGGTCGAAGATGTCTTCGTAATCGTCGGAGCCAAATGA
PROTEIN sequence
Length: 270
MNRLLLVIVFLIVAGAVLLSTLGSDAMHKMQSGFLGIVAPFVKTGSAVQRQIGEMGSGLKNLDELEAEYNRLTVENRELRTENQLLRDIEAENNKLRQALEYRERSVFKLLPARVISRDGSTWWSTIKINRGFEDGVEVDEPVLTDAGLVGKTTTVAKNESIVLLITDETCKVAGKVEGSREQGILSGVRVQQSDTPGLLQMDFLSKQANLQPGQKIYSAGVSNGVFPSGIPIGVVKSFQVRALDGRAIVEPAVDTSMVEDVFVIVGAK*