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berkeley_reactor_200306_planktonic_scaffold_59817_125

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(135860..136909)

Top 3 Functional Annotations

Value Algorithm Source
rod shape-determining protein Mbl n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746B3C similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 341.0
  • Bit_score: 566
  • Evalue 1.50e-158
mreB; rod shape-determining protein MreB similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 336.0
  • Bit_score: 524
  • Evalue 1.50e-146
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 343.0
  • Bit_score: 555
  • Evalue 5.00e-155

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Taxonomy

RHI_Verrucumicrobia_41_10 → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1050
ATGTTTGATAACGTCCTCGGGTTTTTCTCCAATGACATCGGTATCGACCTCGGTACCGCCAACACCCTCGTTTACGTAAAGGACCACGGCATCGTTCTTCGTGAGCCGTCCGTGGTCGCTGTCCAGCAGGGCACCAAAAAGGTGCTCGCGGTCGGCGACGAGGCCAAGCGCATGCTGGGCCGTACTCCCGGCAACATCGTAGCCATCCGTCCGCTCAAGGACGGTGTGATCGCGGATTTCGAGATCACGGAGGCCATGTTGCGCCACTTCATCAGCAAGGTGCACAACCGCCGTCGCATGGTCCGTCCCCGTGTGGTGATCGCTGTCCCCAGCGGCATCACGGAGGTGGAAAAGCGCGCGGTCAAGGACTCCGCCACCCGTGCGGGCGCCCGTGAGGTTTACCTTATCGAGGAGCCCATGGCCGCGGCCATCGGCGTCGGCCTGCCTGTGCAGGATGCGGCGGGCAACATGATCATCGACATTGGCGGCGGCACCACCGAGGTGGCGCTTATCTCGCTTTCCGGCATCGTTTTCAGCCGTAGCGTGCGCGTGGCGGGCGACGAGCTCGACGAGTCGATCATCAACTACATGAAGCGGGCCTACAACCTCATGATCGGTGAGCGCACCGCTGAGGAGATCAAGATCAAGATAGGCTCCGCCTACAAGCTGGAGAAGGAAAACACGATGGAGGTCAAGGGTCGCGATCTCGTGGCCGGTCTGCCAAAAACCATCACCATCTCCTCACAGGAAGTGCGCGAAGCGCTCCTGGAACCCATCTCGACGATCGTGGACTCCGTCCGCATCACGCTCGAGCGATGCCCTCCCGAGCTTTCCGCCGACCTCGTGGACCGCGGTCTCGTGCTCGCGGGTGGCGGCGCATTGCTGCGCGGCCTGGACCGTCTCCTCCAGGAGGAGACCGGCCTGCCCGTGCATGTTGCCGAGGACCCGCTCAGCGCGGTGGCCGAGGGAACTGGCAAGGCGCTGGAGGAGCTCCGCTTCCTTCGCGCGGTGGCTTCTCACGAGCACACGGGTTCCCAGTCCTCGCACTAA
PROTEIN sequence
Length: 350
MFDNVLGFFSNDIGIDLGTANTLVYVKDHGIVLREPSVVAVQQGTKKVLAVGDEAKRMLGRTPGNIVAIRPLKDGVIADFEITEAMLRHFISKVHNRRRMVRPRVVIAVPSGITEVEKRAVKDSATRAGAREVYLIEEPMAAAIGVGLPVQDAAGNMIIDIGGGTTEVALISLSGIVFSRSVRVAGDELDESIINYMKRAYNLMIGERTAEEIKIKIGSAYKLEKENTMEVKGRDLVAGLPKTITISSQEVREALLEPISTIVDSVRITLERCPPELSADLVDRGLVLAGGGALLRGLDRLLQEETGLPVHVAEDPLSAVAEGTGKALEELRFLRAVASHEHTGSQSSH*