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berkeley_reactor_200306_planktonic_scaffold_59817_436

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 498981..500228

Top 3 Functional Annotations

Value Algorithm Source
rhamnose isomerase (EC:5.3.1.14) similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 415.0
  • Bit_score: 618
  • Evalue 1.20e-174
L-rhamnose isomerase {ECO:0000256|HAMAP-Rule:MF_00541}; EC=5.3.1.14 {ECO:0000256|HAMAP-Rule:MF_00541};; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 415.0
  • Bit_score: 618
  • Evalue 5.70e-174
L-rhamnose isomerase n=2 Tax=unclassified Opitutaceae RepID=H1IZS0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 415.0
  • Bit_score: 618
  • Evalue 4.10e-174

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Taxonomy

Opitutaceae bacterium TAV1 → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1248
ATGTCCTCCTCCTACTCCCTAGCCAAAGAAACCTACGCCCAGCTCGGCGTGGATACCGAGGCCGCGCTCCAGACGCTCGGCCAGACCGCCATCTCCCTGCATTGCTGGCAGGGCGACGATGTGGGGGGATTTGAGAATACCGGCGGCTCGCTCACCGGCGGCATCCAGGCCACGGGCAACTACCCCGGCAAGGCCCGCACCATCGAGGAGCTCCGCGCCGATCTCGACGCCGCCCTCGCCCTCATCCCCGGCTCCCGCCGCCTGAATCTCCACGCCATCTACGGCGACTTTTCCAGCGGCAAGGCCGACCGCAACCAGATCGAGGTTTCCCACTTCCAGAGCTGGATCGACTGGGCCAAGGAGCGCAACCTCGGCCTCGACTTCAACCCATCCTATTTTTCGCACCCCCTCTCGGCCAGCGGGTACACGCTCTCCAGCCCCGACGCGGGCATCCGCGCCTTCTGGATCGAGCACGGCCGCCGCTGCCGCCGCATCAGCGCAGAGTTTGGCCGCCAGCTTGGCAAACCCAGCGTGATGAACGTGTGGATTCCCGACGGCTCAAAGGACCTGCCCGTCGACCGCAAGGGCCCGCGCGAGCGCCTGGAGGCCTCGCTCGACGCACTCTTCTCCGAGCAGCTCAACACGCGCCACCACGTCGACGCAGTCGAGTGCAAGCTCTTCGGCATCGGGTCGGAGTCCTACGTCGTCGGCTCGCATGAGTTTTACATGGGCTACGCCGTGAGCCGCAAAAAGGCGCTCTGCCTCGACGCGGGTCACTTCCACCCGACCGAGAGCCTCGCCGACAAGATCAGCTCCACGCTGCAATTCGTCCCCGAGCTGCTGCTCCACGTGAGCCGCGGCGTGCGCTGGGACAGCGACCACGTCGTGCTCTTTGACGACGCCACGCGCGCCATCATGGAGGAACTCGTGCGCGGTAGCTTCCTCAGCCGCACGCACATCGGACTCGATTTCTTCGACGCCAGCATCAACCGCATCGCCGCCTGGGTCATCGGCACCCGCAACGCCCAGAAGAGCCTCCTCGCCGCCCTGCTCGAACCCATCGCGCAGCTCCGCGACGCCGAGAACTCCGGCGACTACGCCACCCGCCTCGCCCTCTTGGAGGAGGCCAAAACGCTCCCGCTTGGCGCGGTCTGGGACGAATTCTGCGAGCGCAACGGCACCCCCGTCGGCCCCGCCTGGATCAAGGAAGTGAAGGCCTACGAGGCCAGCGTCCTTTCCAAGCGCTAA
PROTEIN sequence
Length: 416
MSSSYSLAKETYAQLGVDTEAALQTLGQTAISLHCWQGDDVGGFENTGGSLTGGIQATGNYPGKARTIEELRADLDAALALIPGSRRLNLHAIYGDFSSGKADRNQIEVSHFQSWIDWAKERNLGLDFNPSYFSHPLSASGYTLSSPDAGIRAFWIEHGRRCRRISAEFGRQLGKPSVMNVWIPDGSKDLPVDRKGPRERLEASLDALFSEQLNTRHHVDAVECKLFGIGSESYVVGSHEFYMGYAVSRKKALCLDAGHFHPTESLADKISSTLQFVPELLLHVSRGVRWDSDHVVLFDDATRAIMEELVRGSFLSRTHIGLDFFDASINRIAAWVIGTRNAQKSLLAALLEPIAQLRDAENSGDYATRLALLEEAKTLPLGAVWDEFCERNGTPVGPAWIKEVKAYEASVLSKR*