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berkeley_reactor_200306_planktonic_scaffold_59817_452

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(515578..516237)

Top 3 Functional Annotations

Value Algorithm Source
glycoside hydrolase, family 24 n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746B6E similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 234.0
  • Bit_score: 142
  • Evalue 2.70e-31
Peptidase_M15_2 {ECO:0000313|EMBL:AIA89465.1}; Flags: Fragment;; TaxID=293347 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia; environmental samples.;" source="uncultured Jannaschia sp.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 120.0
  • Bit_score: 128
  • Evalue 7.30e-27
Peptidase M15A similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 121.0
  • Bit_score: 119
  • Evalue 1.20e-24

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Taxonomy

uncultured Jannaschia sp. → Jannaschia → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
GTGCCCGAAGAAGATCCAGCCTCCTCCGCGCCCGAACCCCTGCATCGTCCGGTGTGTCGACGACGGTTTATCGCGTTGCTGGGACTGGCTGGAGCAGGCCTGGCGGTCTCGCGTTATTCCGACCAGTTGCCTGGGGCGTGGAGCCGGTTGAGGGAATATCTTGATTCCCTCTCGCTAGCGATCAACGACGAGGTCGAGCCCTACAATGATGCCGCGGCGGATGCCTATGCCATCTTTCTTGCGACGGCAAATCTGAAGCATGTCCCGATACCTGTCATTTTGCGGCCCCACCGCAATGTGCATGGCACGGTGCGCAATTCCATCCCGCCTCAGCCGCTCTGGCGCAACATTCTGCCGACCTTGCGGGTGGCGGATCGTCTGGCCGGGGAGATGGGGGAGAAGATCGCGATGAACTCTGTTTACCGTTCGCCCGCCTACAATGCCACCTGTCCGGGCGCAGTGCCATCGTCGCAGCATACGCGAAATCGCGCCATCGACCTTTCGTTGCAAAGCTCGCCCCGCGCTGTGGCACGTGTCGTGCGCCAGCTTCGCGATCGCAACGTCTTTTGCGGTGGTATCGGGTTATACACGTCCTTCGTTCACATCGACACGCGCGGGAGGAATGCCGATTGGTGCGGCTCGGGCGTGAAGGACGCCTGA
PROTEIN sequence
Length: 220
VPEEDPASSAPEPLHRPVCRRRFIALLGLAGAGLAVSRYSDQLPGAWSRLREYLDSLSLAINDEVEPYNDAAADAYAIFLATANLKHVPIPVILRPHRNVHGTVRNSIPPQPLWRNILPTLRVADRLAGEMGEKIAMNSVYRSPAYNATCPGAVPSSQHTRNRAIDLSLQSSPRAVARVVRQLRDRNVFCGGIGLYTSFVHIDTRGRNADWCGSGVKDA*