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berkeley_reactor_200306_planktonic_scaffold_59817_522

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(591708..593582)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related-protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSR8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 652.0
  • Bit_score: 722
  • Evalue 2.30e-205
ABC transporter related-protein {ECO:0000313|EMBL:EEF57120.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 652.0
  • Bit_score: 722
  • Evalue 3.20e-205
ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 636.0
  • Bit_score: 694
  • Evalue 1.90e-197

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1875
ATGCTGACCGTATCTCAAGTCTCCAAATCCTACGGGGGAAGAACGCTTTTCTCCGACGCCTCGCTGCAAATCAACCGTGGCGATCGCATCGGATTGATCGGAGCCAACGGCGCAGGCAAGTCGACCTTGTTTTCCCTGATTCTTGGCGAAAATGAGCCGGATGACGGTTCGGTGACCTTCCAGCGCGGTGTCAGCGTAGGCTACCTGCCGCAGGAAAGCGCGCCCTCCGGCGACGAAACCATCCTGCATCTCGCGCTGAGCGGCGTGCCGGAGTGGGACAGCTACGCGCTCGAGCCCAAGGCCAAGCGCATTCTCTCCGGCCTGGCCTTTCGCGAGACTGACTTCGAGCGCGTCGCCCGCACCATGAGCGGCGGCTGGATCATGCGCGCACACCTCGCGAAGCTGCTCGTGATGGAGCCGGACCTCCTGCTCCTGGACGAACCGACGAACCACCTCGATCTCGAATCCCTCGGCTGGTTCCAGAATTACCTCGCCGCCTACGCGGGTTCCATCGTCACGATTTCCCACGACCGCGCGTTTCTCAACGCCATCTGCGACACCATCGTCGAGATTTCCCGCCAGCGGCTGCACCGCTATACGGGTACGTACGACGAATTCGTCGAGCAAAAGAAGGCCCGCGAGGAGCAGTACCTCGCCGCGTACAAAAACCAGCAGCGCGAGATCGAGCACCTGCAGGATTTCATCAACCGCTTCCGCGCCAAGGCCAGCAAGGCCGCCCAGGCCCAGGAACGCATCAAGCGGCTGGATAAGATGGAGCGCCTCGCCCCGCCGGAGCAGGCGGAAGCCACGGTAAAGTTCCGCTTCCCGCAGCCGCAACGCTCCGGCCAGAAGGTGATGGAACTGACCAACGTGCGCCAGGCCTACGGAAGCCACGTCGTTTATGAGGATCTCAACCTCACCGTGGAGCGCGACCAGCGCACCGTCCTCGTCGGACCAAACGGCGCAGGCAAATCCACGCTGCTCAAGATTCTCGCCGGGATGCTCCCGCTTGAGGCTGGCGAGCGCACGCCGGGCCACAATGTTTCGACCGGGTACTTCGCCCAGCAGCGCGTCGAAACGCTCGACCTGAAGCGCACCGTGCTGCAGGAAGCCACGTCGCTCCCTCGCTACGTCTCGGACGAAGCCGCCCGGAGCGTGCTCGGGTCGTTCCTTTTCCGGGGTGACGATGTGTTCAAGACCGTCGGTGTGCTGAGCGGCGGAGAAAAGAGCCGCCTCGCGCTGGTGAAGCTCCTGCTCGACCCGCCGAATTTCCTGCTCCTCGACGAACCGACCACGCACCTCGACATGCCCAGCATCGACGCGCTGGTCAATGCCCTGCGCCAGTACCAGGGCACTCTGGTCTTCGTCAGCCACGACGTCCACTTCATCCGCGCCCTCGCCACCTCCGTGCTGCACGTCCATGCCGGGCGCCTCACGCCGTACGCGGGCAACTACGAATATTATCTGGAGAAATCCCAGGCTGTGGGCGAACGCGAAGCCCTCGTGGCCAAGCTGCACAACCACCAGCCCACTTTTGAAAAAGCGGTCGAAGCTCCTGCCGCCAAGGCTCCCGCTCCAACTCCCGGCCTCGGCCTGAAGGAAATCCGCGAGCAGCGCCGCGCCGAAAGCGAAGCCAACAAGGCTGCCGCCAAGGCCCGCCGCCAGCAGGAAGCCCGCATCGCCAAGCTCGAAGCCGAAGTGGTCGCCCTCGAGAAACAGCAAAAGGAACTGACCGCACAGCTGGAAGACCCCGCCCTGTACAACCAACCCTCAAAAGCCCTCGAGATCAATCGCCAGCTCGCTGGAATCACCGACGCCCTCGAAGCCGCCAACGAAGCCTGGATGACCGCAACCGAGGAACTGGCCGAGGCTTGA
PROTEIN sequence
Length: 625
MLTVSQVSKSYGGRTLFSDASLQINRGDRIGLIGANGAGKSTLFSLILGENEPDDGSVTFQRGVSVGYLPQESAPSGDETILHLALSGVPEWDSYALEPKAKRILSGLAFRETDFERVARTMSGGWIMRAHLAKLLVMEPDLLLLDEPTNHLDLESLGWFQNYLAAYAGSIVTISHDRAFLNAICDTIVEISRQRLHRYTGTYDEFVEQKKAREEQYLAAYKNQQREIEHLQDFINRFRAKASKAAQAQERIKRLDKMERLAPPEQAEATVKFRFPQPQRSGQKVMELTNVRQAYGSHVVYEDLNLTVERDQRTVLVGPNGAGKSTLLKILAGMLPLEAGERTPGHNVSTGYFAQQRVETLDLKRTVLQEATSLPRYVSDEAARSVLGSFLFRGDDVFKTVGVLSGGEKSRLALVKLLLDPPNFLLLDEPTTHLDMPSIDALVNALRQYQGTLVFVSHDVHFIRALATSVLHVHAGRLTPYAGNYEYYLEKSQAVGEREALVAKLHNHQPTFEKAVEAPAAKAPAPTPGLGLKEIREQRRAESEANKAAAKARRQQEARIAKLEAEVVALEKQQKELTAQLEDPALYNQPSKALEINRQLAGITDALEAANEAWMTATEELAEA*