ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_59817_535

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(605982..606392)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI0003786DC6 similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 120.0
  • Bit_score: 135
  • Evalue 2.60e-29
Integral membrane protein {ECO:0000313|EMBL:EFL34416.1}; TaxID=591159 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes DSM 40736.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 121.0
  • Bit_score: 134
  • Evalue 6.30e-29
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 121.0
  • Bit_score: 133
  • Evalue 2.80e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptomyces viridochromogenes → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 411
ATGAAATACATCGAACTCACCTACACCTTGTACCTCATCGTCAGCATTACCCTGACCGTCTGGGTTGCCCGGACGCTATTCCAAAGCGGGAGAGCATTTTTGAACGAATGCTTCCTGGAGAACGACGCCTTGGCGGATAGCGTCAACCGGCTGCTCGTCGTGGGATTTTACCTCGTTAACCTGGGATTCATCGCCCTGTTTCTTAAAACCCCGCACGACCTCACGCAGGTACGGGAGATGTTCGAGCTTCTAAGCAGCAAGCTTGGAGTCGTGCTGCTGACGCTGGGCTTCATGCACTTCGCGAATCTCCTGATCCTGAACCGACTGAGGAACAATGCCATTCGCCATCAGAACGCCGTCCGGCCTCCTGCCATTCCCGGCTACGAAGGTTACAGGAAGGCCAATGTATGA
PROTEIN sequence
Length: 137
MKYIELTYTLYLIVSITLTVWVARTLFQSGRAFLNECFLENDALADSVNRLLVVGFYLVNLGFIALFLKTPHDLTQVREMFELLSSKLGVVLLTLGFMHFANLLILNRLRNNAIRHQNAVRPPAIPGYEGYRKANV*