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berkeley_reactor_200306_planktonic_scaffold_59817_537

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(607348..608235)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Burkholderia sp. JPY251 RepID=UPI00036C285B similarity UNIREF
DB: UNIREF100
  • Identity: 39.0
  • Coverage: 290.0
  • Bit_score: 203
  • Evalue 2.20e-49
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 290.0
  • Bit_score: 202
  • Evalue 1.40e-49
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADG18771.1}; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1002).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.6
  • Coverage: 290.0
  • Bit_score: 202
  • Evalue 7.00e-49

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Taxonomy

Burkholderia sp. CCGE1002 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGGAAATCCGGGAGATCCGCTCCTTTGTCATCCTGGCCGAGCAGCTGCATTTTGGGAATGCCGCCCGGCTCCTGAATCTCACCCAACCAGCGCTCACCCGTCAGATTCATAAGCTGGAGGAGGAACTCGGAGGAGAGCTGCTCAGCAGGGGCCGACACGGCGCCCATCTCACCACCATGGGAGATACTTTCCTCGCCAAGGCCCGCCTTCTTCTGGCCGATGCTGATCAGCTGGTAAAATCCATCCGCCTGATCGCGCAGGGTGAGGCGGGTCGGTTGCGCATCGGCTTCGGATTTCACACTTTGGATCTGGTTTCCCGGGCTGTTGTGCGCCTGCGCAAAGTCCAGCCTCTCGTCACGGTCACGCTGCGGGATATGTCGACGTCGGAGCAGATCGACGACCTGCTCTCGGGCAAGATCGATATGGGGTTTATCCGATCATCAAAAGTTCCCGGGCTGAACATGCATCAACTCCTGACCGACCGGCTCATTCTTGCCGTAGGCGAAGGCATGATTTTTTCAAAGGACTTCGAGCTCGGGAATCTCCGCGATCAGCCCTTCGTATTCATTTCCCGCGAAAAATCACCCACCCTGCACAGGCATGCTCTTGAGCTCTGCGGCTACCATGGATTTCACCCCCGTATCGTGCAGGAGGTCTCGGAGATTACGACCGTGCTCGGCCTCGTGCGCGCCGGTCTCGGTGTTTCGATGATACCGGAATCCTTCGCCCAAAACCGTTATAAGGGAGTCCGCTTTCGCCAAATCGCCGATCCACGCGCAGTCTGGCCCGTGGTGGCTGCCTGGAAAAAGCAAGATCCCGAGCCGCTCATCGCCCGCTTTCTCGACCTCCTGAAGATCGAGGCACGATTATCGGAAGCCCGAGGGTAA
PROTEIN sequence
Length: 296
MEIREIRSFVILAEQLHFGNAARLLNLTQPALTRQIHKLEEELGGELLSRGRHGAHLTTMGDTFLAKARLLLADADQLVKSIRLIAQGEAGRLRIGFGFHTLDLVSRAVVRLRKVQPLVTVTLRDMSTSEQIDDLLSGKIDMGFIRSSKVPGLNMHQLLTDRLILAVGEGMIFSKDFELGNLRDQPFVFISREKSPTLHRHALELCGYHGFHPRIVQEVSEITTVLGLVRAGLGVSMIPESFAQNRYKGVRFRQIADPRAVWPVVAAWKKQDPEPLIARFLDLLKIEARLSEARG*