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berkeley_reactor_200306_planktonic_scaffold_122971_17

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 23216..23941

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 240.0
  • Bit_score: 326
  • Evalue 2.60e-86
Ribonuclease PH n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UNC2_AKKM8 similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 240.0
  • Bit_score: 326
  • Evalue 1.90e-86
ribonuclease PH similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 240.0
  • Bit_score: 326
  • Evalue 5.30e-87

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Taxonomy

Akkermansia muciniphila → Akkermansia → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 726
ATGCCGTCCCGAGATAACAGATTACCCTCTGAGTTGCGGAAAATTGCCCTGGAACCGGGTATCGCTCCGAACGCTCAGGGAAGCGTATTGTGCAGTTTCGGCAATACCCGGGTGATTTGCGCGGCATCGATCGAGGATACCGTGCCACGCTGGATGAGAGAGCAGGGGGTGCAGGGTGGTTGGTTGACGGCCGAGTACTCGATGCTCCCGTACTCTACGCTGTCGCGGAAGACGCGCGACGCCACCCGCGGCAAGATCGATGGGCGATCGACGGAGATCCAGCGCTTGATCGGGCGTTCTCTTCGCGCGGCGGTCGACCTGGGTGCAATAGGCTCGCGGACGATCTGGATCGATTGTGATGTCTTGCAAGCGGATGGCGGCACCCGCACCGCATCGATTACCGGTGCCTGTGTGGCGGTGGAACTTGCCCTGCGCTCTTTGGTCAATCAAGGGAAGCTTCCTCGACTGCCAATGAAGCGCCGCGTCGCTGCAGTCAGCGTGGGCATCGTGGATGGAGAACCGCGCCTGGATCTGGACTATCTCGAAGACAGGGACGCCTCGGTCGATATGAATCTGGTCATGACTGACAAATCCGAATATGTCGAAGTGCAGGGTTCAGGCGAGGAAGCGGTCTTTACGGACGCCGAGCTTACCGCCATGCTCGACCTCGGACGCCAAGGCATCCGATCCCTCCTCACCATCCAAAATCAGTTACTCTCCGCATGA
PROTEIN sequence
Length: 242
MPSRDNRLPSELRKIALEPGIAPNAQGSVLCSFGNTRVICAASIEDTVPRWMREQGVQGGWLTAEYSMLPYSTLSRKTRDATRGKIDGRSTEIQRLIGRSLRAAVDLGAIGSRTIWIDCDVLQADGGTRTASITGACVAVELALRSLVNQGKLPRLPMKRRVAAVSVGIVDGEPRLDLDYLEDRDASVDMNLVMTDKSEYVEVQGSGEEAVFTDAELTAMLDLGRQGIRSLLTIQNQLLSA*