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berkeley_reactor_200306_planktonic_scaffold_122971_18

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 23938..24924

Top 3 Functional Annotations

Value Algorithm Source
GDP-mannose 4,6-dehydratase (EC:4.2.1.47) similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 330.0
  • Bit_score: 549
  • Evalue 5.20e-154
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 330.0
  • Bit_score: 549
  • Evalue 2.00e-153
GDP-mannose 4,6-dehydratase n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JN46_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 330.0
  • Bit_score: 549
  • Evalue 1.40e-153

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Taxonomy

Verrucomicrobiae bacterium DG1235 → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 987
ATGAAAAAAGCGCTCATCACCGGCATCACCGGGCAGGACGGCTCCTATCTGGCCGATCTGCTTCTCTCCAAGGGTTACGAGGTTCACGGCATCATTCGCCGTGCGAGTACATTTAACACGTCCCGCATCGATCACCTCTATCAGGATCCCCACGTTAATGGCGTGAAGCTCTTCCTGCATTACGGAGACCTCGCGGACTCCGTGCAGCTCGTGAAGCTGATCTACAACCTGAAGCCGGACGAGATTTATCACCTCGGTGCTCAGAGCCACGTCCGGGTGAGCTTCGATATCCCGGAGTACACCGCCGATGTCACCGGTGTCGCCTCGATCCGCATCCTCGAGGCCATGCGCGAGGCTGGGGTGAACTCCCGCTTCTACCAGGCCTCCAGCAGCGAAATGTACGGCAAGGTTCAGGCGGTGCCGCAGACTGAGACGACCCCGTTCTGGCCTCGCAGTCCGTACGGCGTGGCCAAGGTGTTCGCCTACTGGGCGACCGTGAACTACCGCGAGAGCTACAACATGTTTGCCACGAACGGCATCCTGTTCAATCACGAGAGTCCGCGCCGTGGTGAGACTTTTGTGACCCGCAAGATTTCGCGTGCCGTCGCCGCGATCAAGCTCGGTCTGCAGAAGGAACTCTTCCTCGGCAATATCGACGCCAAGCGCGACTGGGGCTTTGCGCCCGAGTACGTCGAGGCCATGTGGCTCATGCTCCAGCAGGATCAGCCCGATGACTACGTCGTGGCAACCGGCGAGACGCATACCGTGCGCGAGTTTCTCGAGCATGCCTTCGCCCATGTCGATCTCGACTGGAAACAATTCGTCAAGCACGACGAACGCTACGAGCGCCCGGCGGAGGTGGACCTCCTTGTGGGTGACCCGGCCAAAGCCAAGCGCCAGCTCGGCTGGGAGCCGAAGGTGAAATTCGCCGAACTCGTGAAAATCATGGTCGATGCAGACCTAGAGCTCTTGAAAAAACGGGCTTGA
PROTEIN sequence
Length: 329
MKKALITGITGQDGSYLADLLLSKGYEVHGIIRRASTFNTSRIDHLYQDPHVNGVKLFLHYGDLADSVQLVKLIYNLKPDEIYHLGAQSHVRVSFDIPEYTADVTGVASIRILEAMREAGVNSRFYQASSSEMYGKVQAVPQTETTPFWPRSPYGVAKVFAYWATVNYRESYNMFATNGILFNHESPRRGETFVTRKISRAVAAIKLGLQKELFLGNIDAKRDWGFAPEYVEAMWLMLQQDQPDDYVVATGETHTVREFLEHAFAHVDLDWKQFVKHDERYERPAEVDLLVGDPAKAKRQLGWEPKVKFAELVKIMVDADLELLKKRA*