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berkeley_reactor_200306_planktonic_scaffold_122971_36

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(41669..41887)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5N1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 71.0
  • Bit_score: 70
  • Evalue 7.20e-10
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 68.0
  • Bit_score: 61
  • Evalue 9.50e-08
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 63.0
  • Bit_score: 72
  • Evalue 2.70e-10

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Taxonomy

RHI_Verrucumicrobia_41_10 → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 219
ATGAACAGCATTTTCATCGAAGAAGCCTCCAAAGTCGCCACCGATCCTCAAGTATTGATCAACATGGTCTCCAAGCGCGTGCGTCAGCTCAGCGCGGGGAGCCGCCCGATGGTTTCGGTGGAGGGCCGCATGGGTCTCGCCGACATCGCGCTCGCCGAGATCGCCCAGGGGCGCTTGGTCGTTTCAAAGCCAGAGAACGGCGAGGAGCCGCAGGAATAA
PROTEIN sequence
Length: 73
MNSIFIEEASKVATDPQVLINMVSKRVRQLSAGSRPMVSVEGRMGLADIALAEIAQGRLVVSKPENGEEPQE*