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berkeley_reactor_200306_planktonic_scaffold_122971

Search features with annotation key words

Displaying items 31-60 of 1489 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_122971_30
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

36246..37376
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745532
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
berkeley_reactor_200306_planktonic_scaffold_122971_31
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

37377..38456
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU95_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY22133.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_122971_32
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(38461..39024)
DNA (564bp) protein (188aa)
Glutamine amidotransferase of anthranilate synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVB1_9BACT
Glutamine amidotransferase of anthranilate synthase {ECO:0000313|EMBL:EDY21353.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
pabA; protein PabA
berkeley_reactor_200306_planktonic_scaffold_122971_33
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(39043..40542)
DNA (1500bp) protein (500aa)
Anthranilate synthase component I {ECO:0000313|EMBL:EDY21354.1}; EC=4.1.3.27 {ECO:0000313|EMBL:EDY21354.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
anthranilate synthase subunit I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVB2_9BACT
berkeley_reactor_200306_planktonic_scaffold_122971_34
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(40539..41141)
DNA (603bp) protein (201aa)
LemA family protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R602_ISOPI
LemA family protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
berkeley_reactor_200306_planktonic_scaffold_122971_35
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(41186..41644)
DNA (459bp) protein (153aa)
SsrA-binding protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCN7_9BACT
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SsrA-binding protein
berkeley_reactor_200306_planktonic_scaffold_122971_36
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(41669..41887)
DNA (219bp) protein (73aa)
DNA-directed RNA polymerase subunit omega n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5N1_9BACT
DNA-directed RNA polymerase subunit omega
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
berkeley_reactor_200306_planktonic_scaffold_122971_37
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

42122..42733
DNA (612bp) protein (204aa)
HNH endonuclease n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CV26_9BACT
HNH endonuclease {ECO:0000313|EMBL:EDY22414.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
HNH endonuclease
berkeley_reactor_200306_planktonic_scaffold_122971_38
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(43227..43640)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI0003759A19
lactoylglutathione lyase
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
berkeley_reactor_200306_planktonic_scaffold_122971_39

Not on your lists

comp(43687..44016)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PXT0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH99739.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
berkeley_reactor_200306_planktonic_scaffold_122971_40
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(44147..45409)
DNA (1263bp) protein (421aa)
Putative glycosyltransferase family 28 N-terminal domain protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC93_9ZZZZ
glycosyl transferase family protein
Tax=GWC1_Treponema_61_84_curated
berkeley_reactor_200306_planktonic_scaffold_122971_41
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(45406..46347)
DNA (942bp) protein (314aa)
Oxidoreductase, aldo/keto reductase family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JKK6_9BACT
Oxidoreductase, aldo/keto reductase family {ECO:0000313|EMBL:EDY83625.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
aldo/keto reductase
berkeley_reactor_200306_planktonic_scaffold_122971_42
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

46468..46779
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZD0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20821.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_122971_43
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

46787..47326
DNA (540bp) protein (180aa)
DJ-1 family protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZW41_OPITP
DJ-1 family protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
berkeley_reactor_200306_planktonic_scaffold_122971_44
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47331..47780)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI0003765841
Ion transport 2 domain protein {ECO:0000313|EMBL:EGV18680.1}; Flags: Precursor;; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
membrane protein
berkeley_reactor_200306_planktonic_scaffold_122971_45
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(47835..48956)
DNA (1122bp) protein (374aa)
HI0933 family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVI3_9BACT
HI0933 family protein {ECO:0000313|EMBL:EDY21425.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
membrane protein
berkeley_reactor_200306_planktonic_scaffold_122971_46
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(49014..49478)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTM0_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
berkeley_reactor_200306_planktonic_scaffold_122971_47
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(49475..50401)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9T7_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25635.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_122971_48
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(50563..51564)
DNA (1002bp) protein (334aa)
beta-ketoacyl-acyl-carrier-protein synthase II (EC:2.3.1.179)
Beta-ketoacyl synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTL4_9BACT
Beta-ketoacyl synthase {ECO:0000313|EMBL:EDY21888.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
berkeley_reactor_200306_planktonic_scaffold_122971_49
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(51561..52736)
DNA (1176bp) protein (392aa)
Beta-ketoacyl synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTN3_9BACT
Beta-ketoacyl synthase {ECO:0000313|EMBL:EDY21887.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
3-oxoacyl-ACP synthase II
berkeley_reactor_200306_planktonic_scaffold_122971_50
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(52785..54137)
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000370599C
multidrug transporter MATE
Multidrug transporter MATE {ECO:0000313|EMBL:AHF91833.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
berkeley_reactor_200306_planktonic_scaffold_122971_51
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

54323..55570
DNA (1248bp) protein (416aa)
Amidohydrolase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0Z5_9BACT
Amidohydrolase {ECO:0000313|EMBL:EDY20007.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ssnA; Cytosine deaminase or related metal-dependent hydrolase
berkeley_reactor_200306_planktonic_scaffold_122971_52
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55567..57798)
DNA (2232bp) protein (744aa)
Fusaric acid resistance protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HGP4_9RHIZ
Fusaric acid resistance protein {ECO:0000313|EMBL:KJR64309.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
conserved membrane protein of unknown function [Fusaric acid resistance protein, conserved region]
berkeley_reactor_200306_planktonic_scaffold_122971_53
unknown

Not on your lists

57958..58113
DNA (156bp) protein (52aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_122971_54
Agarivorans albus, Agarivorans, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58113..58979
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Agarivorans albus MKT 106 RepID=R9PL06_AGAAL
Uncharacterized protein {ECO:0000313|EMBL:GAD02064.1}; TaxID=1331007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Agarivorans.;" source="Agarivorans albus MKT 106.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_122971_55
unknown

Not on your lists

59022..59330
DNA (309bp) protein (103aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_122971_56
unknown

Not on your lists

59327..59677
DNA (351bp) protein (117aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_122971_57
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59804..60985
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F4A75B
Signal transduction histidine kinase {ECO:0000313|EMBL:CDS55324.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
atypical hybrid histidine kinase
berkeley_reactor_200306_planktonic_scaffold_122971_58
Phaseolus vulgaris, Phaseolus, Fabales, rosids, Streptophyta, Viridiplantae

Not on your lists

61059..62093
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Phaseolus vulgaris RepID=V7CH94_PHAVU
Uncharacterized protein {ECO:0000313|EMBL:ESW28271.1}; TaxID=3885 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus.;" source="Phaseolus vulgaris (Kidney bean) (French bean).;"
cobalamin synthesis protein P47K
berkeley_reactor_200306_planktonic_scaffold_122971_59
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

62096..62989
DNA (894bp) protein (298aa)
Putative uncharacterized protein id=4418907 bin=GWF2_Lentisphaerae_50_93 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein
Tax=GWF2_Lentisphaerae_50_93_curated
Displaying items 31-60 of 1489 in total

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