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berkeley_reactor_200306_planktonic_scaffold_122971_57

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 59804..60985

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F4A75B similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 373.0
  • Bit_score: 341
  • Evalue 9.10e-91
Signal transduction histidine kinase {ECO:0000313|EMBL:CDS55324.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 393.0
  • Bit_score: 329
  • Evalue 5.00e-87
atypical hybrid histidine kinase similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 370.0
  • Bit_score: 312
  • Evalue 9.80e-83

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Taxonomy

Polaromonas sp. CG9_12 → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1182
ATGCCTGCGGCAATCGATTCTTGCGTCGTTTTCCCCGAGGCGGCGACGACCTTCATGAAATCTCCCATCGACCCTAATATCATTCCCCTGGATCAAAAGTACCGAGACGAATTTTTGGGAGTTTTGGCGCACGAGTTGAGAAACCCGCTGGCTCCGTTGCGCAACGGCCTGGAGATCATCCGACGGTCGCAGTCCGATCCGAAAATCGTCCACGAGGCCCTTGAAGTCATGGACCGGCAGTTGCAGCAGCTTTCGGGTCTGATCGATGGTCTCGTTGAGGCCAGCAACCTCCGGCAGGGGCTTATCGAGCTCAAGGTCGAGACGCTCGATATCGGGAGCATTATCGAGGAATCGGTAAAATCGATCGGTGCCCGGCTCGCGGAGGGCGGGCCGAAGCTGATATTTACGCCGTTAGCAGAACCGCTCCTTGTGGAAGGTGATCCCAGACGGATCAGGCAAATCCTGGTCAACCTGCTCGAAAATGCCGTGAAGTATACCGGACGGGACGGATGCATCGAAGTCGATGCGCATGGGGAATCCGGAGAAGTTGAGATTTCCGTGAAGGATGATGGCATAGGCATTCCTCAGGAGAAACTCGTTGAGATATTCGAGATGTTCTCGAAGGCAGATCACTCGCTGGAGCGAGGCCAGGATGGTCTCGGGCTGGGTTTGTCGATTGTTCGCGGTCTCGTCGAGCTTCACGGAGGTTCCGTCGAGGCCCACAGCGTAGGGCCGGGAGCAGGGAGTCTATTCATCGTCCGCCTGCCGCAGGCAACGTCTAGCGTGGGCTCTCCGCGTATTTCGGAGAAGCGGCGAGTGCTTGTGGTTGATGACAATCGCGATTGTGCCTCGAGCCTGGCCATGATGCTCGGAATCATGGGATTTGAAACCGAGACGGCGGCGGATGGTGTCGAGGCATTGCGCACCGCTGCGGCTTACCGTCCGGACGCCATCTTCCTTGATATCGCGATGCCGAAGCTCAACGGTTACGACGTTTGCAAGGTGATCCGAGAACAGTCTTGGGGGAAAGACCTGGTCGTCATTGCGCTCACTGGCTGGGGGCAAAACGACGATATCGAGCGATCCCGGGAAGCGGGCTTTGATCATCATTTGGTCAAACCCATTGAGCTTACCTCGCTTGAGCCGATTGTGAGAGAAATCAAGGCTGTTCACTCCTCATAG
PROTEIN sequence
Length: 394
MPAAIDSCVVFPEAATTFMKSPIDPNIIPLDQKYRDEFLGVLAHELRNPLAPLRNGLEIIRRSQSDPKIVHEALEVMDRQLQQLSGLIDGLVEASNLRQGLIELKVETLDIGSIIEESVKSIGARLAEGGPKLIFTPLAEPLLVEGDPRRIRQILVNLLENAVKYTGRDGCIEVDAHGESGEVEISVKDDGIGIPQEKLVEIFEMFSKADHSLERGQDGLGLGLSIVRGLVELHGGSVEAHSVGPGAGSLFIVRLPQATSSVGSPRISEKRRVLVVDDNRDCASSLAMMLGIMGFETETAADGVEALRTAAAYRPDAIFLDIAMPKLNGYDVCKVIREQSWGKDLVVIALTGWGQNDDIERSREAGFDHHLVKPIELTSLEPIVREIKAVHSS*