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berkeley_reactor_200306_planktonic_scaffold_122971_44

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(47331..47780)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI0003765841 similarity UNIREF
DB: UNIREF100
  • Identity: 48.7
  • Coverage: 150.0
  • Bit_score: 147
  • Evalue 7.30e-33
Ion transport 2 domain protein {ECO:0000313|EMBL:EGV18680.1}; Flags: Precursor;; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.7
  • Coverage: 141.0
  • Bit_score: 134
  • Evalue 6.90e-29
membrane protein similarity KEGG
DB: KEGG
  • Identity: 34.8
  • Coverage: 135.0
  • Bit_score: 84
  • Evalue 2.80e-14

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Taxonomy

Thiocapsa marina → Thiocapsa → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGAGCGGCACAATCAGACGTCCCACCATCCATCGAGTCTATTTGGTCGGTCTGCTGCTTGCCGCCGGACTTTTCGCCCTGCACACGTGGGTGATGTTTGAAACCGGCTGGGTACTTATGCATCACGCCGGGCAGATCACCCAAGGTCCCGAAGCCCATGTCTTCGGCCCGCTGATCATTCTCGCAGCGTTCTTCATCCTTTTTATCACCCACCTTTTTGAAGCAGCTGCATGGGCGATGTTATTCTGGCGCATGAAGGAGTTTCCCACCTTCAGCGAGAGCCTCTACTTCACCGGCACATCGATCACCGCCCTGGGTTATGGAGATGTCGTCCTTCGCCCGCCCTGGCGGGTCCTCGGTCCCATCATGGCCATCAATGGGCTGCTGATGTTCGGATGTTCCACGGCCTTTCTCTTTCTGATCATCCAGAGGGTCTGGGCAACTCTCTGA
PROTEIN sequence
Length: 150
MSGTIRRPTIHRVYLVGLLLAAGLFALHTWVMFETGWVLMHHAGQITQGPEAHVFGPLIILAAFFILFITHLFEAAAWAMLFWRMKEFPTFSESLYFTGTSITALGYGDVVLRPPWRVLGPIMAINGLLMFGCSTAFLFLIIQRVWATL*