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berkeley_reactor_200306_planktonic_scaffold_122971_50

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(52785..54137)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000370599C similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 419.0
  • Bit_score: 367
  • Evalue 1.40e-98
multidrug transporter MATE similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 454.0
  • Bit_score: 334
  • Evalue 3.60e-89
Multidrug transporter MATE {ECO:0000313|EMBL:AHF91833.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.3
  • Coverage: 454.0
  • Bit_score: 334
  • Evalue 1.80e-88

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Taxonomy

Opitutaceae bacterium TAV5 → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1353
ATGTCTCTCCTTTCCCGCTCCCTGCAAGAAAACCGCCGCACCCTGGCGCTAGCCTTCCCGATCGCCGCTGGCAACGCGGGCCAGATGCTCATGGGCGTGGCAGATACAGTCATGGTGGGCCAGGTCGGAGTGGTGCCCCTCGCCGCCTGCGCTTTTGCCAATACCGTCCTGGCCGTACCGCTCGTCTTTGGATTTGGATTCCTCTCTGGAGTGAGCGTTCGCACCTCGCATGCTTTTGGTGCAGACAAGCCCGCGTCCGCCGGTGAATCGCTCAAGTGGGGAGCCCTGCTCGCTCTGGCCACAGGCATACTCGTTGCCCTGCTCATCCAGTGCGGCGTGCCGCTGTTGCCCCTGCTCGGCCAAAGCCCCGACGTCAACCGGGCATGCGTAACATTTCTGCTTCTTTGTGCGTGGTCTGTCATCCCGGTCTATCTGACGAGTGCGGCCAAGAGCTACGCAGAAGCTTTGGGACATCCCTGGGAACCGTTCTGGATCATGATGGGCGGCGTACTGCTCAACATCTTCCTCAACTGGGTCTTCATCTATGGCAATCTGGGCGCTCCGGCTCTCGGTCTCGAGGGTGCTGGCGTGGCGACCCTCATATCTCGCATCGTTACGATGCTCGGCGTTGTAACGTTCATCTTGTCCTCGCGGGAGTTTGCCCGTTATCGCCCCCGCAATCCCTTCGATTTTCGCGACCGGGCGGAGATCCGCGCCCTCATCAAGATCGGTCTCCCAGCGGGTACCATGCATCTGGCGGAAGTGGGGGGATTTTCGTTTGGCTCGGTCATGATGGGCTGGGCGGGAGTGGTGCCGCTTGCCGCCCACCAAATCGCCATTACCTGCGCAGCCACGGTATTCATGATCCCCCTGGGTGTTTCGCAAGCTGTCGCCGTGCGTATCGGCCAGGCTCGCGGAGCCAAGGCTCCGGAGCGTTTTCTCCCGATCGCGATTGGCGCCCAGTCGGTGGTCGTGTCGCTGATGTTCCTATCGACGCTCGTCTTCGTTCTCGGTGGGCATTGGATCGCAAGAGCTTTTGTCAGCGACCCGGCGGTGGTTGCCTTGACGACCAAGCTTCTCTTGCTGGCAGGCATTTTTCAGATCGTCGATGGCATCCAGATCGTCTGCTCGGGAGCTTTGCGGGGATTTGAGGATACACGGGTACCGATGTTTATCGGCATTTTCTCCTATTGGGCTGTAGCGTTGCCCATTTCCTATCTCCTCGCGTTTCACACGGGAATTGGCCCCGCCGGGGTATGGATCGGATTTGTCGTTGGTCTGTGGGTCGCGGCGGTTTCTCTGGTCTGGCGTCTCTGGCTGCGCATAGTGACCGCCTCAAGAACATCCAAATAA
PROTEIN sequence
Length: 451
MSLLSRSLQENRRTLALAFPIAAGNAGQMLMGVADTVMVGQVGVVPLAACAFANTVLAVPLVFGFGFLSGVSVRTSHAFGADKPASAGESLKWGALLALATGILVALLIQCGVPLLPLLGQSPDVNRACVTFLLLCAWSVIPVYLTSAAKSYAEALGHPWEPFWIMMGGVLLNIFLNWVFIYGNLGAPALGLEGAGVATLISRIVTMLGVVTFILSSREFARYRPRNPFDFRDRAEIRALIKIGLPAGTMHLAEVGGFSFGSVMMGWAGVVPLAAHQIAITCAATVFMIPLGVSQAVAVRIGQARGAKAPERFLPIAIGAQSVVVSLMFLSTLVFVLGGHWIARAFVSDPAVVALTTKLLLLAGIFQIVDGIQIVCSGALRGFEDTRVPMFIGIFSYWAVALPISYLLAFHTGIGPAGVWIGFVVGLWVAAVSLVWRLWLRIVTASRTSK*