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berkeley_reactor_200306_planktonic_scaffold_122971_1342

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 1518833..1519411

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RecO n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6P3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 178.0
  • Bit_score: 138
  • Evalue 5.70e-30
DNA repair protein RecO {ECO:0000313|EMBL:EDY17844.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.9
  • Coverage: 178.0
  • Bit_score: 138
  • Evalue 8.00e-30
Recombination protein O RecO similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 180.0
  • Bit_score: 107
  • Evalue 2.30e-21

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 579
ATGGAAACCTCCCGGGCCATCCTCCTGCGTAAAACCAACTGGTCCGAGACCAGCCTGATCATCTCCTGGCTCACCGAGGAACATGGCGCCGTGCGCACCGTGGCTCGGGGCGCGCGAAAGGCGGGCAGCCCGTTTGCGGGGAAGCTCGACCTGTTTTACGTGGCGGAGATCAATTTCCGTGTCAGCACCAAGAGCGACCTGCACGTGCTCCAGGAAAGTCACGTCCTGGGAGCCTTCGACCCGAATCGCGCGGGCAGCGGCGGTTTTTACCTCGCGGCGTATTTTGCGGAACTGGCAGGCCGCGCCGCCCCCGCCATGAGCCCCGCGCCGGAGATCTTTGACCTGCTTAAGCGCGGCCTCGACTACGTACAAACCACCCCGGCAGAAGCCAAGGGGCTGCTCCATTTTGAAAAGGAGCTTTGTCGCGAACTGGGCGTTTACGACGCCTCGGGACAACTCAGTCCGGCCCAGGCGCTGGAGTCGCTTTACGGACGCCTCCCAGCCTCCCGCGAGACCGCATGGCGGTTCCTGGAGCAGAAAAAATCCGCTCGCCAGCCCCCTCGAGATCACACAGAATAA
PROTEIN sequence
Length: 193
METSRAILLRKTNWSETSLIISWLTEEHGAVRTVARGARKAGSPFAGKLDLFYVAEINFRVSTKSDLHVLQESHVLGAFDPNRAGSGGFYLAAYFAELAGRAAPAMSPAPEIFDLLKRGLDYVQTTPAEAKGLLHFEKELCRELGVYDASGQLSPAQALESLYGRLPASRETAWRFLEQKKSARQPPRDHTE*