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berkeley_reactor_200306_planktonic_scaffold_122971

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Displaying items 1351-1380 of 1489 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_122971_1333
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(1512042..1513049)
DNA (1008bp) protein (336aa)
ADP-heptose synthase n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174528C
rfaE; D-glycero-beta-D-manno-heptose 7-phosphate kinase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
berkeley_reactor_200306_planktonic_scaffold_122971_1334
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

1513056..1513904
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBP8_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
berkeley_reactor_200306_planktonic_scaffold_122971_1335
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1513901..1514347
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBP7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16149.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
berkeley_reactor_200306_planktonic_scaffold_122971_1336
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1514334..1515323
DNA (990bp) protein (330aa)
PhoH family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBP6_9BACT
PhoH family protein {ECO:0000313|EMBL:EDY16148.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
phoH; phosphate starvation-inducible protein PhoH, predicted ATPase
berkeley_reactor_200306_planktonic_scaffold_122971_1337
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1515342..1516952
DNA (1611bp) protein (537aa)
Metal dependent phosphohydrolase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBP5_9BACT
Metal dependent phosphohydrolase {ECO:0000313|EMBL:EDY16147.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
membrane-associated HD superfamily hydrolase
berkeley_reactor_200306_planktonic_scaffold_122971_1338
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

1516930..1517400
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744E18
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
berkeley_reactor_200306_planktonic_scaffold_122971_1339
unknown

Not on your lists

1517468..1518046
DNA (579bp) protein (193aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_122971_1340
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1518043..1518333
DNA (291bp) protein (97aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBP2_9BACT
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ATP-dependent Clp protease adapter protein ClpS
berkeley_reactor_200306_planktonic_scaffold_122971_1341
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1518335..1518820
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBP1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16143.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
berkeley_reactor_200306_planktonic_scaffold_122971_1342
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1518833..1519411
DNA (579bp) protein (193aa)
DNA repair protein RecO n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6P3_9BACT
DNA repair protein RecO {ECO:0000313|EMBL:EDY17844.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Recombination protein O RecO
berkeley_reactor_200306_planktonic_scaffold_122971_1343
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1519429..1520238
DNA (810bp) protein (270aa)
TPR repeat-containing protein n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UDA2_CYAP2
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ADN14093.1}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
berkeley_reactor_200306_planktonic_scaffold_122971_1344
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

1520235..1520732
DNA (498bp) protein (166aa)
RfaE bifunctional protein id=3662752 bin=GWF2_Lentisphaerae_57_35 species=Chlorobaculum parvum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
RfaE bifunctional protein
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
berkeley_reactor_200306_planktonic_scaffold_122971_1345
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1520740..1521714)
DNA (975bp) protein (325aa)
MoxR-like ATPases (EC:3.6.3.-)
ATPase associated with various cellular activities AAA_3 id=3287906 bin=GWF2_Methylomirabilis_70_14 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
berkeley_reactor_200306_planktonic_scaffold_122971_1346
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1521759..1523159)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXW3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21111.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
TolA protein
berkeley_reactor_200306_planktonic_scaffold_122971_1347
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1523254..1523595
DNA (342bp) protein (114aa)
Nitrogen regulatory protein P-II-1 n=2 Tax=Neisseriaceae RepID=Q7NWE5_CHRVO
glnB; nitrogen regulatory protein P-II-1
Nitrogen regulatory protein P-II 1 {ECO:0000313|EMBL:KJH66245.1}; TaxID=536 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium violaceum.;"
berkeley_reactor_200306_planktonic_scaffold_122971_1348
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1523715..1524755)
DNA (1041bp) protein (347aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8R3_9BACT
Nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:EDY17121.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
metal dependent phosphohydrolase
berkeley_reactor_200306_planktonic_scaffold_122971_1349
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

comp(1524791..1525783)
DNA (993bp) protein (331aa)
Bile acid:sodium symporter n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ21_OPITP
bile acid:sodium symporter
Bile acid:sodium symporter {ECO:0000313|EMBL:AKC82430.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
berkeley_reactor_200306_planktonic_scaffold_122971_1350
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1525799..1526890)
DNA (1092bp) protein (364aa)
Cyclic dehypoxanthine futalosine synthase {ECO:0000256|HAMAP-Rule:MF_00992}; Short=Cyclic DHFL synthase {ECO:0000256|HAMAP-Rule:MF_00992};; EC=1.21.98.1 {ECO:0000256|HAMAP-Rule:MF_00992};; Dehypoxanthine futalosine cyclase {ECO:0000256|HAMAP-Rule:MF_00992}; Menaquinone biosynthetic enzyme MqnC {ECO:0000256|HAMAP-Rule:MF_00992}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Radical SAM domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D717_9BACT
Radical SAM domain-containing protein
berkeley_reactor_200306_planktonic_scaffold_122971_1351
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1526920..1527642)
DNA (723bp) protein (241aa)
Membrane protein {ECO:0000313|EMBL:KGO98393.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
Putative uncharacterized protein id=2750864 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_122971_1352
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

1527720..1528322
DNA (603bp) protein (201aa)
Peptidase S16 lon domain protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZMQ1_OPITP
peptidase S16 lon domain-containing protein
Peptidase S16 lon domain protein {ECO:0000313|EMBL:ACB75329.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
berkeley_reactor_200306_planktonic_scaffold_122971_1353
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(1528336..1529034)
DNA (699bp) protein (233aa)
Alanine racemase domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZS0_9BACT
alanine racemase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
berkeley_reactor_200306_planktonic_scaffold_122971_1354
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1529093..1530025
DNA (933bp) protein (311aa)
Transcriptional regulator, LysR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZS1_9BACT
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EDY20235.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
LysR family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_122971_1355
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

1530079..1531035
DNA (957bp) protein (319aa)
Polysaccharide deacetylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZS3_9BACT
polysaccharide deacetylase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
berkeley_reactor_200306_planktonic_scaffold_122971_1356
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(1531062..1531694)
DNA (633bp) protein (211aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D044_9BACT
ErfK/YbiS/YcfS/YnhG family protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
berkeley_reactor_200306_planktonic_scaffold_122971_1357
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1531745..1532296
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU51_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY22089.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_122971_1358
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

1532293..1532892
DNA (600bp) protein (200aa)
Uracil-DNA glycosylase superfamily n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZWV1_OPITP
uracil-DNA glycosylase superfamily protein
Uracil-DNA glycosylase superfamily {ECO:0000313|EMBL:ACB74230.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
berkeley_reactor_200306_planktonic_scaffold_122971_1359
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1532889..1534784)
DNA (1896bp) protein (632aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZM6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20190.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_122971_1360
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1534781..1535179)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZM8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20192.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
berkeley_reactor_200306_planktonic_scaffold_122971_1361
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1535239..1536306)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XVA1_9BACT
Inorganic phosphate transporter {ECO:0000313|EMBL:KGO33308.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
putative low-affinity inorganic phosphate transporter
berkeley_reactor_200306_planktonic_scaffold_122971_1362
Aeromonas molluscorum, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1536350..1537675
DNA (1326bp) protein (442aa)
Alkaline phosphatase n=1 Tax=Aeromonas molluscorum 848 RepID=R1F7C8_9GAMM
alkaline phosphatase
Alkaline phosphatase {ECO:0000313|EMBL:EOD55642.1}; TaxID=1268236 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas molluscorum 848.;"
Displaying items 1351-1380 of 1489 in total

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