ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_122971_1355

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 1530079..1531035

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide deacetylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZS3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 46.9
  • Coverage: 318.0
  • Bit_score: 267
  • Evalue 1.00e-68
polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 309.0
  • Bit_score: 261
  • Evalue 2.10e-67
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 315.0
  • Bit_score: 295
  • Evalue 5.00e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_Verrucumicrobia_41_10 → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 957
ATGAAACGCCTTATCACCGCTGCAATCCTGCCGATTGCTTTCTTCTGCTCGTGCCAGTCGGCACGGACACAAAACCAGTCTCAAACGCCTGCTCCCCAGCCGCAAGTCGTCGTCGTGCCGACGGATGAACTCTCCCGTGAGCCGTCCGTGGGACCAGCGACCAACGCCAGCGCGGCCCCTGCCTCTCAAGCCTCTCCCGCCCAGGAGCTGCGTGGAGACTCCAGCGACATGCAGATGGCTCTCCCGCCTCCGGCCACGCAGTCCTCGGCGTCGACAGGCCCCAGGATCAGCTACAACTCCTGCAACGTGAACGGCCCGTACATCGCGATGACGTTCGATGACGGTCCCAGCCCGGAGCTCACCCCCAAGCTTCTCGACATCCTCAAGGCGCGCGGCATCAAAGCCACGTTTTTCGTGGTCGGCCAAAATGCCGCCCAATATCCCGACATCCTCAAGCGCATGGTCGCCGAGGGACATGAAATCGGCAATCACAGCTGGAGCCACCCGGCCCTGACCAAGCTCGGAGCCGATGGTGTCAAAAAGCAGATCGAGAGCACAAACGCCGCGATCGAGCAGGCCACCGGGCAGAAAGTCACCGTGATGCGCCCGCCTTACGGTGCGACGAGCCAGATCCTGAATCGCCGGTACGCCGACCAGTACGGCATGAAGGTCATCCTGTGGTCAGTCGATCCCCTCGATTGGAAATATCGCAATTCGGCCAGGGTTTCTTCCCAGATCATCCAGGGAGCCCACCCGGGAGCCATCATTCTGTCGCACGACATTCACGCCACGACCGTGGCGGCGATGCCCGAGACCTTCGATGCCCTGCTGGCCAAGGGATACAAGTTTGTCACCGTGTCCGAGTTGATCGCGATGGATCAGCCGACACAGCTTGTGAAGCGCGAGGAAACCAAGCCACAGAGCGCTCCGGCGGCCACATCCCAAGGGACCCGCTAA
PROTEIN sequence
Length: 319
MKRLITAAILPIAFFCSCQSARTQNQSQTPAPQPQVVVVPTDELSREPSVGPATNASAAPASQASPAQELRGDSSDMQMALPPPATQSSASTGPRISYNSCNVNGPYIAMTFDDGPSPELTPKLLDILKARGIKATFFVVGQNAAQYPDILKRMVAEGHEIGNHSWSHPALTKLGADGVKKQIESTNAAIEQATGQKVTVMRPPYGATSQILNRRYADQYGMKVILWSVDPLDWKYRNSARVSSQIIQGAHPGAIILSHDIHATTVAAMPETFDALLAKGYKFVTVSELIAMDQPTQLVKREETKPQSAPAATSQGTR*