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berkeley_reactor_200306_planktonic_scaffold_122971_1351

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(1526920..1527642)

Top 3 Functional Annotations

Value Algorithm Source
Membrane protein {ECO:0000313|EMBL:KGO98393.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 250.0
  • Bit_score: 280
  • Evalue 1.30e-72
Putative uncharacterized protein id=2750864 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 251.0
  • Bit_score: 275
  • Evalue 4.90e-71
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 252.0
  • Bit_score: 274
  • Evalue 1.80e-71

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Taxonomy

Lysobacter defluvii → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGGCTTCAGGCAATCCTGCATTCAACGAGAAGACCTTTCAGCAGATCAGCCGCTCAGGCGGCGCCGCCATGACCGTCACGGGAACGATTTCCAAGACGGCCATTCTCCTACTCCTGGTCATTCTCGGCACCACCTTTACGTGGAATCTCTCGGGTCCCCTGGCCATGCCGCTCATGTTTGGCGGTATGATCGGCGGTTTCATCGTCAGTCTCGTCACCATCTTCAAAAAGGAATGGGCTCCCGTGACTGCGCCGATTTACGCGATCCTGCAGGGTCTGTTCCTCGGCGGTATCTCGGCGGCGTATAATGCGCAGTTTCATGGCATTGTCCTGCAGGCGGTGTTGCTCACCTTTGGCGTGGCGGCAGCCATCCTCGGCCTTTACCAGACCCGCGTCATCCGTGTTACGCAGCGCCTGCGCTCCATCATCTTCGCCGCTACGGCGGGCATCGCGATTTACTACCTCATCGCCATGGGAATGAGCTTTTTCGGCATGCAGGCGCCCATGATCTGGGATACCGGCTGGCTGGGCATCGGATTCAGCGTCTTTGTCGTGATCCTTGCCGCCTTCAATCTCCTCCTCGACTTTGACCTGATCGAGCAGGGCGTGGCTTACGGTGCTCCCCGCTACATGGAGTGGTATTGCGGCTTTGGCATCATGGTCACCCTCGTGTGGCTGTATCTCGAGATTCTCCGCCTGCTCAGCAAATTGCAGCGGCGCTAA
PROTEIN sequence
Length: 241
MASGNPAFNEKTFQQISRSGGAAMTVTGTISKTAILLLLVILGTTFTWNLSGPLAMPLMFGGMIGGFIVSLVTIFKKEWAPVTAPIYAILQGLFLGGISAAYNAQFHGIVLQAVLLTFGVAAAILGLYQTRVIRVTQRLRSIIFAATAGIAIYYLIAMGMSFFGMQAPMIWDTGWLGIGFSVFVVILAAFNLLLDFDLIEQGVAYGAPRYMEWYCGFGIMVTLVWLYLEILRLLSKLQRR*