ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_122971_1348

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(1523715..1524755)

Top 3 Functional Annotations

Value Algorithm Source
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8R3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 347.0
  • Bit_score: 367
  • Evalue 8.00e-99
Nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:EDY17121.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.9
  • Coverage: 347.0
  • Bit_score: 367
  • Evalue 1.10e-98
metal dependent phosphohydrolase similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 346.0
  • Bit_score: 292
  • Evalue 1.60e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1041
ATGTCGGTTGTCCTCACCATTTCCGCCCTCCGTTCCCGTGCCCGGGAGGGTGCAGTTGCCGCCAAGGTTCGCGCCCAGGTCGATGACCTCATCCGCAAGGAGGATCGCAACGCCAAGCCATTCTGGGAGGTAAAGCTCCGCGATGGCGGTGACGCCCTGGCGCTCAAGGCCTGGAACAGCTCGTCCAACTTTGCCGTCTGCGAGGAGCTCGAGCGTGGTGACACGGTCGAGGTGGAGGGGGAGTTCAGCATCGGCTCGTACGGGCTGGATGCCCAGCGCTGGACGATGCGGTATCTCACCAAGGATGAGGAAAAGCAGCTTTTCGAAGGCGACGCCGACACGCGCGCGGTGAACGAGGCGGATTTCGCCTCGGTGACCCGGCTGGTCGAGTCCATCCGCGAACCGCGGCTTTCCGCGCTTTGCCGCACATTCCTGGCGGAGTTCGGCCCGCGCTTCCGCCGCGCCGCCGCCGCGCGGAACAATCACCACGCCTTTCGCGGTGGCCTGCTGCGCCACACCGCTCAGATGATGATCTCCGCCGATGCGATCTCCGGGGTTTACCCGGCGCTGAATCGCGACCTCCTGCTGGCCGGGACACTCTTTCACGACTCCGGCAAGCTCTGGGAAATGTGCCCGCCGGAGAATGGATTTGAGGTGCCTCGTGAACTGCGCGGTGAACTCCTCGGCCACATCACCATCGGCATCGAACTGGTCAACAGTCTGTGGCGGAAAATCGCCACGGAGGAGTGGAAGACTCTCCAGCCCGCCAGCGAAGACATCCGCGCCCACCTCCTGCATCTCGTGGCCGCCCATCATGGGGAACTGGAATACGGTTCCCCGGTCGAACCCAAGACACCCGAGGCGATCGCCCTCCACTACATCGACAATCTCGATGCCCGGCTGGAGATGATTTTTACCGCCTACAAAAAGCAGCCGGAAATCGCACCCGGCGTTCGCGAGCGGGTCTGGGCGCTGAATGTTTCGCCCGTGAATGCGCTCCCCGCTTGGGAAGCTCCTGGAGAGGATACCACCGGAGCCTGA
PROTEIN sequence
Length: 347
MSVVLTISALRSRAREGAVAAKVRAQVDDLIRKEDRNAKPFWEVKLRDGGDALALKAWNSSSNFAVCEELERGDTVEVEGEFSIGSYGLDAQRWTMRYLTKDEEKQLFEGDADTRAVNEADFASVTRLVESIREPRLSALCRTFLAEFGPRFRRAAAARNNHHAFRGGLLRHTAQMMISADAISGVYPALNRDLLLAGTLFHDSGKLWEMCPPENGFEVPRELRGELLGHITIGIELVNSLWRKIATEEWKTLQPASEDIRAHLLHLVAAHHGELEYGSPVEPKTPEAIALHYIDNLDARLEMIFTAYKKQPEIAPGVRERVWALNVSPVNALPAWEAPGEDTTGA*