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berkeley_reactor_200306_planktonic_scaffold_122971_1430

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 1628771..1629850

Top 3 Functional Annotations

Value Algorithm Source
Alanine racemase id=4489727 bin=GWF2_Lentisphaerae_50_93 species=Caldicellulosiruptor saccharolyticus genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S similarity UNIREF
DB: UNIREF100
  • Identity: 29.2
  • Coverage: 359.0
  • Bit_score: 142
  • Evalue 5.70e-31
Ribose operon repressor similarity KEGG
DB: KEGG
  • Identity: 31.3
  • Coverage: 348.0
  • Bit_score: 117
  • Evalue 4.20e-24
Tax=GWF2_Lentisphaerae_50_93_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 29.2
  • Coverage: 359.0
  • Bit_score: 142
  • Evalue 8.00e-31

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Taxonomy

GWF2_Lentisphaerae_50_93_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 1080
ATGGCTCGGCGCGTCGCACACACCAAACACTTCAAGATCTCCAAGCTCCTGACCGAGAAGATTCGGCTCATGGGTCCCGGAGACATGCTGCCGACGATCGATGAACTGAAATCCCGGTACAAGTGTTCCCAGGCCACCATCACCCAGGCACTCGACCGGCTGCGATTCCGGGGATTGATCGAGCGTCCGTCGGGCAGGATGCGCCTGGTGGTTGCCCAGAACGGACAGGCTCCGCGATTTCAACTCAACCTGATCCGCCCTCTCTGGCCTTCGCCAGACTTTGACTCGATCACCAACCGCATCTATGAGATGGGCCTCAAGGAGCACTTTGGCTTTGGGTTGCACGTGTACTCCGACGGGAAGCGTCTGAATATCGAGCAGGCGCTAAAAGACGCCGACGCCGGCCTGATCATTGGCGACAGAAGCATCTCCGAGGCGCAGATCGAGGCCATCAATGGATCGCGCAAACCCATAGTCTTTCTCCGCGAGAAGCCCAGGGAGGTTCTCCGTGCAGGGTCTGTCTGGGTGGATGACGAAGTGGTCGGCAAGCTGGCGACGAAACACCTGCTGGATCTGGGCCACAAGCGCATCGCCGTCATGCTCAGCGAGCCCTATAATCCCTCCAGCACGACACGGCTCGAGGGCTGGCGGCACGCAATGACGCGGGCGAGGATACCAAATATCGACTCCCTCGTGGCTGACTGCTCCGTACCATCCGGCACCGAGGCCATCGGTGGCTCCTACGAGCTTCTTTGCAAATGGCTCGACAAGCACCCGATGGATTTCACCGCTATTTTCTGCGTCGGATGGACCGGCGCCCTTGCCGCGCTCCATGCGTTCCGGGAAAGAGGCATCCGGGTTCCCGACCAGATGAGTGTGATCACCTACGCCAGCGAGTCACCGCTGTGCAACTACAGCGCCCCGCCTCTCACCACGCTCCAGATCGATCTCGATCGCTATACGCGTGAAGCCCTCCGGCTCGTCGAGGAGAGCATCGCTGCTGCCTCCGAAGTTTCGCGCAATGTCCTGATCAAGCCCGACCTCGTAGTGCGCGAAAGCACGGCCAGGCCGCGCAGATAA
PROTEIN sequence
Length: 360
MARRVAHTKHFKISKLLTEKIRLMGPGDMLPTIDELKSRYKCSQATITQALDRLRFRGLIERPSGRMRLVVAQNGQAPRFQLNLIRPLWPSPDFDSITNRIYEMGLKEHFGFGLHVYSDGKRLNIEQALKDADAGLIIGDRSISEAQIEAINGSRKPIVFLREKPREVLRAGSVWVDDEVVGKLATKHLLDLGHKRIAVMLSEPYNPSSTTRLEGWRHAMTRARIPNIDSLVADCSVPSGTEAIGGSYELLCKWLDKHPMDFTAIFCVGWTGALAALHAFRERGIRVPDQMSVITYASESPLCNYSAPPLTTLQIDLDRYTREALRLVEESIAAASEVSRNVLIKPDLVVRESTARPRR*