name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_planktonic_scaffold_122971_1422
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria
|
Not on your lists |
1619264..1620388
|
Oxidoreductase domain protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CQH5_TRURR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKC82975.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1423
unknown
|
Not on your lists |
comp(1620435..1620560)
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_122971_1424
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(1621244..1622749)
|
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKE0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59610.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_trna_8
unknown
|
Not on your lists |
comp(1622820..1622901)
|
transferRNA Leu
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1425
CG_Syntroph_02, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1623040..1624368)
|
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LH74_SYNFM
hypothetical protein
Tax=CG_Syntroph_02
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1426
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(1624371..1625069)
|
macrolide ABC transporter ATP-binding protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017468BD
macrolide ABC transporter ATP-binding protein
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:EIQ01167.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1427
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(1625066..1626355)
|
RND transporter n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017468BE
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:EIQ01168.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
RND transporter
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1428
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(1626352..1627779)
|
Efflux transporter, outer membrane factor lipoprotein, NodT family n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B1M7_9BACT
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:EIQ01169.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
RND transporter
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1429
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
1627994..1628479
|
Regulatory protein MarR n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IN03_9BACT
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:AHF92836.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1430
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria
|
Not on your lists |
1628771..1629850
|
Alanine racemase id=4489727 bin=GWF2_Lentisphaerae_50_93 species=Caldicellulosiruptor saccharolyticus genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Ribose operon repressor
Tax=GWF2_Lentisphaerae_50_93_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1431
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
1629957..1631327
|
Glutamine synthetase, type III {ECO:0000313|EMBL:ADE55090.1}; EC=6.3.1.2 {ECO:0000313|EMBL:ADE55090.1};; TaxID=583355 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita.;" source="Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193; / KCTC 12865).;"
glutamine synthetase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746372
glutamine synthetase
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1432
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1631355..1632191
|
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y165_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36658.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1433
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria
|
Not on your lists |
1632194..1633075
|
ABC transporter related n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSX9_9FIRM
ABC transporter related {ECO:0000313|EMBL:EAX46835.1}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
nitrate/sulfonate/bicarbonate ABC transporter ATPase
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1434
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
1633072..1634025
|
Aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B311_DESCC
aliphatic sulfonate ABC transporter substrate-binding protein
Aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein {ECO:0000313|EMBL:AEF93915.1}; Flags: Precursor;; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 /; CO-1-SRB).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1435
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1634033..1634659
|
cysteine hydrolase n=1 Tax=Virgibacillus halodenitrificans RepID=UPI0002FE54A7
cysteine hydrolase
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1436
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
1634659..1635525
|
Polysaccharide deacetylase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XA63_9BACT
Polysaccharide deacetylase {ECO:0000313|EMBL:EEF63404.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
polysaccharide deacetylase
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1437
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1635534..1636577
|
methyl-accepting chemotaxis sensory transducer n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746371
methyl-accepting chemotaxis protein
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1438
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
1636619..1637272
|
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI000363944D
erfK; erfK/srfK family protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1439
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria
|
Not on your lists |
1637496..1638902
|
Sulfatase n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R917_PIRSD
sulfatase
Sulfatase {ECO:0000313|EMBL:ADB15844.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1440
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1638899..1639795
|
hypothetical protein n=1 Tax=Burkholderia bryophila RepID=UPI00036B798A
Uncharacterized protein {ECO:0000313|EMBL:ESZ12449.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1441
Candida tropicalis, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi
|
Not on your lists |
comp(1639856..1640548)
|
Predicted protein n=1 Tax=Candida tropicalis (strain ATCC MYA-3404 / T1) RepID=C5MIE5_CANTT
Predicted protein {ECO:0000313|EMBL:EER30439.1}; TaxID=294747 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida.;" source="Candida tropicalis (strain ATCC MYA-3404 / T1) (Yeast).;"
collagen triple helix repeat-containing protein
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1442
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria
|
Not on your lists |
comp(1640666..1642072)
|
glucuronate isomerase (EC:5.3.1.12)
Uronate isomerase {ECO:0000255|HAMAP-Rule:MF_00675}; EC=5.3.1.12 {ECO:0000255|HAMAP-Rule:MF_00675};; Glucuronate isomerase {ECO:0000255|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000255|HAMAP-Rule:MF_00675}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Uronate isomerase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=UXAC_SOLUE
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1443
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(1642115..1642747)
|
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWH4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21766.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1444
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
1642821..1643522
|
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7G9_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1445
uncultured Verrucomicrobia bacterium, Verrucomicrobia, Bacteria
|
Not on your lists |
1643563..1643937
|
Translation initiation factor SUI1 n=1 Tax=uncultured Verrucomicrobia bacterium RepID=D2DXP0_9BACT
Translation initiation factor SUI1 {ECO:0000313|EMBL:ACO70863.1}; TaxID=156588 species="Bacteria; Verrucomicrobia; environmental samples.;" source="uncultured Verrucomicrobia bacterium.;"
translation initiation factor SUI1
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1446
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(1643959..1645170)
|
Radical SAM domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TX79_9CHLR
syrB; transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1447
CG_Arma_02, Armatimonadetes, Bacteria
|
Not on your lists |
1645339..1646337
|
2-dehydro-3-deoxygluconokinase (EC:2.7.1.45)
PfkB domain protein n=1 Tax=Pelosinus fermentans JBW45 RepID=I8TRR4_9FIRM
Tax=CG_Arma_02
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1448
uncultured bacterium, Bacteria
|
Not on your lists |
comp(1646334..1647992)
|
hypothetical protein n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI000380F773
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48809.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1449
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria
|
Not on your lists |
comp(1647989..1648564)
|
Rhodanese domain-containing protein n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RTX1_9PLAN
Rhodanese domain-containing protein {ECO:0000313|EMBL:EMI22656.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
rhodanese-related sulfurtransferase
|
|
berkeley_reactor_200306_planktonic_scaffold_122971_1450
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
1648602..1648943
|
Transcriptional regulator, ArsR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAB9_9BACT
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EEF63460.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
transcriptional regulator
|