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berkeley_reactor_200306_planktonic_scaffold_122971_1436

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 1634659..1635525

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide deacetylase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XA63_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 280.0
  • Bit_score: 456
  • Evalue 1.10e-125
Polysaccharide deacetylase {ECO:0000313|EMBL:EEF63404.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 280.0
  • Bit_score: 456
  • Evalue 1.50e-125
polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 283.0
  • Bit_score: 255
  • Evalue 1.40e-65

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 867
ATGAATGCCTTTTCTCCGCAGCCGCGATTCACCTGGCCGGGAGGGGCCAAGGTCGCCGTCATGTTGTGCTTCGACGTCGACGGCGAAACCACCGCCCTCGAGCATGACCCCGCCCTGGCGAGGCGCCTGACCACCATGTCGCAATGCGAGTATGGTCCGAAGGTGGGTGTGCCGCGCCTGCTCGGGCTGCTCGACCACTGCCAGGTGCCCGCCACGTTTTTTATCCCGGGGTACATTGCCGAGCATCACCCGGAGATGACCCGCGCGGTGCAGGCCGCCGGGCACGAGATCGGGCTGCACGGGTATTTGCACGAGCGCCTGATCACGCTCAACGAAACCCAGGAGGAGGCGATCCTGCAAAAGAGCTTCACCATTCTGGAGGATCTCACCGGTACTCGCCCCGTCGGCTATCGCGCGCCGTGGTTTGAGCTGAATCCCTGGACACCCTCAGTCCTGCAACGCAATGGCGTCTTCTACGTCGCCAGCGCCATGGGCGACGACGTGCCGTATCGTCATCATAACGGCCTCATCGAAATCCCAGGCCAGTGGATGCTGGAAGATTGGGAGCAGTTTGCGTTTAACGCCGATCCCGCGTGGGGTTCCATCCCGGAGAATTGCGACAAGGTCTTCGATCTCTGGTGGAAGGAATTTGAGGCCATGTACGATTTCGGCTGCTGCTTTGTGCTGACGCTGCATCCGTGGCTCTCGGGGCGTCCATCCCGAGTTCGGCTGCTGGAACGGCTGATCAACGCGATGAAGGCCAAGCCCGGCGTGTGGTTTGCTCGCGGCGCGGAGATCGCGCGCTGGTACGACCAGACACCAGAAGCCCGGCGGGAGGTTGATTTCGACCGTCTCGGAGGTAAATAG
PROTEIN sequence
Length: 289
MNAFSPQPRFTWPGGAKVAVMLCFDVDGETTALEHDPALARRLTTMSQCEYGPKVGVPRLLGLLDHCQVPATFFIPGYIAEHHPEMTRAVQAAGHEIGLHGYLHERLITLNETQEEAILQKSFTILEDLTGTRPVGYRAPWFELNPWTPSVLQRNGVFYVASAMGDDVPYRHHNGLIEIPGQWMLEDWEQFAFNADPAWGSIPENCDKVFDLWWKEFEAMYDFGCCFVLTLHPWLSGRPSRVRLLERLINAMKAKPGVWFARGAEIARWYDQTPEARREVDFDRLGGK*