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berkeley_reactor_200306_planktonic_scaffold_122971_1453

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 1654439..1655251

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003766250 similarity UNIREF
DB: UNIREF100
  • Identity: 43.7
  • Coverage: 238.0
  • Bit_score: 192
  • Evalue 3.60e-46
LytTR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 259.0
  • Bit_score: 189
  • Evalue 6.60e-46
Putative two-component response regulator protein {ECO:0000313|EMBL:CDH83351.1}; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.5
  • Coverage: 259.0
  • Bit_score: 188
  • Evalue 1.20e-44

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Taxonomy

Sinorhizobium meliloti → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 813
ATGAATTCGCCAGTCACCGTCACGCATCCGTCTGCCGAGATGACGACACCTGTCGCATCGGCGCACGGCCCCATCCGCGTCATGCTCATCGACGACGAACGTCTCGCCCGACAAGGGTTGCGCGAGCTGCTGCACGAGTTTTCCGACGTCGAGATCGTCGGCGAGGCCGATACAGCCGCCTCTGCCGTGGCGCAGATCCCGACGCTTTCGCCCGATGTCATCTTTCTCGATATCCGTCTCCCGGGCGGCGATGGATTCAACGTCCTGGAGTCTCTCGACCGTGTACCGCTCGTGGTCTTCGTCACGGCGTACTCGGATTACGCCACGCAGGCCTTTGACGTCGAGGCGGTCGATTATCTGCTCAAGCCTGTCCGTCGCTCGCGACTGGAGGAGACCCTGCGCCGCATCCGCTCCGAGATCGGCTCGGGCGACCAGCCGCCCTACGCCCTCTCCGATCGCATCTGCCTGCGCACTCCCGAGCGCACCATCATCGCGCCGCTTTCGAATCTCATTTCCCTGAAGGCCGAGGGAGATTTCACCCGTGTCGCCGTGGCCGAGCTTTCCCCGCTGTTGATCTGCCAGACGCTCGGCATCTACGAGCGCACACTTCCCTCGCCGCCTTTTGTCCGGGTGGATCGCTCCCTTATCCTGAACCTCAACCGGCTGAGCTCAGTGGAGATCAGCCCCTCGCGAGGCGCCCGGGTCTTCATGGAAGGGGCGGAGGAGCCGATACCCGTCGGCCGTACCGGCCTGCGCCGCCTGCGCGCCGCCCTGCCCCAGCATCTCTCCGGCATCCCGGAAACCGAGAGCTAA
PROTEIN sequence
Length: 271
MNSPVTVTHPSAEMTTPVASAHGPIRVMLIDDERLARQGLRELLHEFSDVEIVGEADTAASAVAQIPTLSPDVIFLDIRLPGGDGFNVLESLDRVPLVVFVTAYSDYATQAFDVEAVDYLLKPVRRSRLEETLRRIRSEIGSGDQPPYALSDRICLRTPERTIIAPLSNLISLKAEGDFTRVAVAELSPLLICQTLGIYERTLPSPPFVRVDRSLILNLNRLSSVEISPSRGARVFMEGAEEPIPVGRTGLRRLRAALPQHLSGIPETES*