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berkeley_reactor_200306_planktonic_scaffold_122971_1466

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 1670326..1672902

Top 3 Functional Annotations

Value Algorithm Source
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 884.0
  • Bit_score: 1110
  • Evalue 0.0
Valine--tRNA ligase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNG0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 884.0
  • Bit_score: 1110
  • Evalue 0.0
valyl-tRNA synthetase similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 898.0
  • Bit_score: 953
  • Evalue 4.10e-275

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2577
ATGGCTGAACTTTCCAAAGCGTACGAACCGCAGGCGGTAGAAGACCGGCTTTATGCGTGGTGGCTCGAGCAACGTTGCTTCGAGGCGGACCCGCAGTCGGCCAAACCGGCGTATTCCATCGTCATCCCGCCGCCGAACGTGACGGGCGTGCTCACGCTGGGGCACGTGCTGAACAACTCGATCCAGGACATCCTGGCCCGTCGCGCCCGCATGCAGGGGCACGAGGTGCTGTGGCTGCCGGGCACGGACCATGCCGGCATCGCCACCCAGACCGTCGTGGAGCGCAAGCTCCGCAAGGAGGAGCACAAGACCCGCCACGACCTCGGGCGCGAGGAATTCCTCAAGCGCGTGTGGGAGTGGAAGGAAAAGCACGGCGGCATCATCATCAACCAGCTGAAGAAGCTCGGCTGCTCGTGCGACTGGAGCCGGGAGCGCTTCACCATGGACGAGGCCTACGCGCGGCGCGTGCAGGAGGTCTTCGTGGACCTCTACAACAAGGGCCTCATCTACCGCGGCGTGCGGATGGTGAACTGGTGCCCGGTTTCCCTCACCGCATTGAGCGACGAGGAGGTGATCCCGACGCCGCACAAGGGCTTCCTGTATCACTTCAAGGTCGAGGTGGTGGAGGAGCCCGGCACGTGGCTGGAGATCGCGACGACGCGGCCCGAGACGATCATGGGCGACACGGGCGTGGCGGTGAACCCCAAGGACCCGCGCTATGCCCACCTCATCGGCAAGCACGTGCGGCGTCCGCTCCCGCTGGATAACCGCGCGGAGATTCCCATCGTGGGCGACGAGGCGGTGGATTTTGAGTTCGGCACGGGCGTGCTGAAGGTGACCCCGGCCCATGACAAGGTGGACTACGAGATCGGCCTGCGCCACGGGCTGGCCGTGATCGACGTTTTGAACCCCAACGGGACCCTGAACGACCTGGCCGGCGAGGAATTCGCGGGGCTGGATCGCTTTGAGGGGCGCGAGGCCGCGGTGGAGAAGCTCCGCGAGCTCGGCCTGCTGGTGAAGGAGGAGCCGCACGAGAACAACGTGGGCTACAGCGAGCGCGCGGGCGTGCCGATCGAGCCGAGGCTCTCCGAGCAGTGGTTCCTGAAGTACCCGATGACCGTGCAGGCGCGCGACGCCGTGCGCAACCACCTCATCCGGTTCTTCCCCGACCGCTGGGAAAAGGTCTACGACCACTGGCTGGAAAACATCCAGGACTGGTGCATCTCGCGCCAGCTCTGGTGGGGCCATCGCATCCCGGTCTGGAACAAGGACGGCGAGGTGCGCTGCCAGGTGGACAGCCCCGGCGAGGGCTGGGTGCAGGATGGCGACGTGCTCGACACGTGGTTCTCCTCCTGGCTGTGGGCGCACGACACGATGGACGACGCCACGCGGGCCAAGTTTTACCCCACGAGCGTGCTCGTGACGGGGCCGGACATCATTTTCTTCTGGGTGGCCCGCATGATCATGGCGGGGCTGGAGTACATGGGCGAGGTGCCGTTTCGCCATGTGTACTTCACCGGCATCATCCGCGACAAGCAGGGCAAGAAGATGTCGAAATCGCTGGGCAACTCGCCCGACCCGCTCGACCTCATCGCCAAGGTGGGTGCCGATGGGTTGCGCTTTGGCATCATCCGCATCGCGCCGCAGGGCCAGGACATCCGCTACGACGAGCAGCAGATCGTCGAGGGGCGCAATTTCTGCAACAAATTCTGGAACGCCTGCCGGTTCCGCCAGATCCAGGGCGAGATCGACCCGGCGGCGGACCCGTCGAAGCACGAGCTCTCGCTCTTCGCGAAAGACCTGCTGGCGAAGCTCGACGCCACCATCCGGCGCATCGACACGGCGTACGACGAATATCGCTTCAGCGAGGTGGCGCAGGCGCTCTATGATTTTGTCTGGGGCGACTTCTGCGACCGCTTCATCGAGGCGGCCAAGGCGGATTTCCAAAACCCCGCCCGCCGCGAGGGCACGCTGGCCACGATCGACTACGTGATCGGCCGCGTGCTGCGCCTGCTGCACCCCTACGCGCCCTTTATCACCGAGGAGCTGTGGCACGAACTGGGCTACGGCACGGGGAGCATTCAGTTCGCGGAATGGCCCAAGGCCCACGGCTGGGCGGCCGACCCCCGCGCCGAGGCGGCCTTTGATGCCGCCGCGCAGGCCCGCAACCTCCGCGCGACCTACAACCTGCCGTCGAACAAGCGCCTCCGCTGGTTGCTCCAGCCAAGCGAACCCTGGGTGGCGGGCGAAACCGGCGTGCTTTCCGTCCTGCTCAATGCCGAGGCCATCGAGATCGTGACCGAGCGCCCGGCGGGTTCCGTCGCCTCCTGCCCGAGCCCGATCGGCCTGCTCCTCCTCCCACTGGAGGGCATCATCGACCCCGAGAGCGAAAAAACGCGCCTCGCCGGGGAGATCAAGAAGGTCGAGGTGGAGATCAAGAAGGTGCAGGGCAAGCTCTCCAGCGAGTCCTTCGTCAACGGAGCCCCCGCCGAGGTGGTCGCCGAACATCGGGCGCGCGAGGCAGGCTGGAAGAGCCGTCTGGAAGCACTACGCGACGCTGTGGCAAGCCTCGGCTAG
PROTEIN sequence
Length: 859
MAELSKAYEPQAVEDRLYAWWLEQRCFEADPQSAKPAYSIVIPPPNVTGVLTLGHVLNNSIQDILARRARMQGHEVLWLPGTDHAGIATQTVVERKLRKEEHKTRHDLGREEFLKRVWEWKEKHGGIIINQLKKLGCSCDWSRERFTMDEAYARRVQEVFVDLYNKGLIYRGVRMVNWCPVSLTALSDEEVIPTPHKGFLYHFKVEVVEEPGTWLEIATTRPETIMGDTGVAVNPKDPRYAHLIGKHVRRPLPLDNRAEIPIVGDEAVDFEFGTGVLKVTPAHDKVDYEIGLRHGLAVIDVLNPNGTLNDLAGEEFAGLDRFEGREAAVEKLRELGLLVKEEPHENNVGYSERAGVPIEPRLSEQWFLKYPMTVQARDAVRNHLIRFFPDRWEKVYDHWLENIQDWCISRQLWWGHRIPVWNKDGEVRCQVDSPGEGWVQDGDVLDTWFSSWLWAHDTMDDATRAKFYPTSVLVTGPDIIFFWVARMIMAGLEYMGEVPFRHVYFTGIIRDKQGKKMSKSLGNSPDPLDLIAKVGADGLRFGIIRIAPQGQDIRYDEQQIVEGRNFCNKFWNACRFRQIQGEIDPAADPSKHELSLFAKDLLAKLDATIRRIDTAYDEYRFSEVAQALYDFVWGDFCDRFIEAAKADFQNPARREGTLATIDYVIGRVLRLLHPYAPFITEELWHELGYGTGSIQFAEWPKAHGWAADPRAEAAFDAAAQARNLRATYNLPSNKRLRWLLQPSEPWVAGETGVLSVLLNAEAIEIVTERPAGSVASCPSPIGLLLLPLEGIIDPESEKTRLAGEIKKVEVEIKKVQGKLSSESFVNGAPAEVVAEHRAREAGWKSRLEALRDAVASLG*