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berkeley_reactor_200306_planktonic_scaffold_151594_75

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 90178..90588

Top 3 Functional Annotations

Value Algorithm Source
Biopolymer transport protein ExbD/TolR n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVP3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 40.2
  • Coverage: 132.0
  • Bit_score: 104
  • Evalue 8.50e-20
exbD; biopolymer transport protein ExbD/TolR similarity KEGG
DB: KEGG
  • Identity: 30.6
  • Coverage: 144.0
  • Bit_score: 65
  • Evalue 7.20e-09
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.7
  • Coverage: 131.0
  • Bit_score: 112
  • Evalue 3.30e-22

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Taxonomy

RHI_Verrucumicrobia_41_10 → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 411
GTGAAACTCCGGCGGACAGCCGCCCCCATCCCGGGGGTTCTGTACCTCGCGCCAGGCATTCAGCTCGCGCTGGTGCTGATCGTGTTTCTGCTCATCAGCTCGAGCTTCCTGCTCCAGCCAGGCGTCGCCGTCAACCTGCCCAAGTCGCCTTTCATCCTTTCCCCGCAACGCAATCCACGCGTCATCGCCATCACTCCTCCGCCACTTTCGGCGATCTATTTTGAAAACCAGCAGGTAAGCGAGGCCGAGTTGCGCACGCGACTCTCGTCGCTGAAAGGGCGCACACAGACGATCGTAATCAAGGCCGACAAGCGGGCCTTCTATGACCAGATCTCGGCGGTGATGAATATCGCTCTCGAGTTGGGATTCCCCGTTGTCCTCGCCTCCACCGAGCAGACTCCTGGCTTGTGA
PROTEIN sequence
Length: 137
VKLRRTAAPIPGVLYLAPGIQLALVLIVFLLISSSFLLQPGVAVNLPKSPFILSPQRNPRVIAITPPPLSAIYFENQQVSEAELRTRLSSLKGRTQTIVIKADKRAFYDQISAVMNIALELGFPVVLASTEQTPGL*