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berkeley_reactor_200306_planktonic_scaffold_151594_87

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(100182..101114)

Top 3 Functional Annotations

Value Algorithm Source
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.4
  • Coverage: 307.0
  • Bit_score: 459
  • Evalue 3.30e-126
GDP-L-fucose synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6X9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 307.0
  • Bit_score: 459
  • Evalue 2.40e-126
NAD-dependent epimerase/dehydratase similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 307.0
  • Bit_score: 428
  • Evalue 1.30e-117

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 933
ATGAACAAAGACGTACCAGTCTACGTGGCAGGCCACCGGGGGATGGTGGGAAGCGGCATTGTGCGCGCCCTCGAGCGCGCGGGGTATACCCGTATCCTCACGCGGACTCGTACCGAACTCGACCTGCTGGATCGCGCCGCGGTGCGGAGCTTCTTTGAGACCGAGCGCCCGCGCCTCGTGGTGGATGCCGCGGCAAAGGTCGGCGGCATCATCGCGAACAGCGAGCAACCTGTAGAGTTCCTGCTCCAGAACGTCACGATTCAAAACAACATCATCGAGGCGGCGGCGGACTTTGGGGTCGACAAGCTGCTCTTCCTCGGCAGCTCCTGCATTTACCCGAAGCTCGCGCCACAGCCGATCACGGAGGACTCCCTGCTCTCCGGCCCGCTCGAGCCGACGAACGACGCCTACGCACTGGCCAAGATCGCGGGCATCAAGCTCTGCCAGGCGTACGCGAAGCAGTACGGGAAGAATTTCATCTCCGGCATGCCGACAAACCTCTACGGTCCGAACGACAACTTTGACCTGCACACCTCGCATGTGCTGCCCGCACTGATCCGCAAGGTCCACGAGGCCAAGCTGCGCGGCGACAAATCGTATGTCGTGTGGGGCACGGGTTCGCCCCGGCGGGAATTCCTCCATGTCGACGACCTATCCGAGGCGTGTTTGTTCCTGCTGGAGAATTACAACGAGCCGGAGATCGTGAACATCGGCTGCGGCGAGGATGTGACCATCCGCGAACTGGCCGAGACGGTCTGCGACGTGCTCGGCTTTCAGGGCGAGCTGGTCTTCGATACGACGAAACCCGATGGCACCCCCCGCAAGCTGCTCGACATGTCGAAGCTGTTTTCCATGGGCTGGAAGCCCCGCATTCCGCTGCGCGAAGGCATTCGCGGAGCCTACGACTGGTATCTGCAACACGGCTCGCGGTAA
PROTEIN sequence
Length: 311
MNKDVPVYVAGHRGMVGSGIVRALERAGYTRILTRTRTELDLLDRAAVRSFFETERPRLVVDAAAKVGGIIANSEQPVEFLLQNVTIQNNIIEAAADFGVDKLLFLGSSCIYPKLAPQPITEDSLLSGPLEPTNDAYALAKIAGIKLCQAYAKQYGKNFISGMPTNLYGPNDNFDLHTSHVLPALIRKVHEAKLRGDKSYVVWGTGSPRREFLHVDDLSEACLFLLENYNEPEIVNIGCGEDVTIRELAETVCDVLGFQGELVFDTTKPDGTPRKLLDMSKLFSMGWKPRIPLREGIRGAYDWYLQHGSR*