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berkeley_reactor_200306_planktonic_scaffold_151594_157

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(168547..169023)

Top 3 Functional Annotations

Value Algorithm Source
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.7
  • Coverage: 157.0
  • Bit_score: 214
  • Evalue 7.30e-53
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12) similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 157.0
  • Bit_score: 179
  • Evalue 5.20e-43
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5H6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 70.7
  • Coverage: 157.0
  • Bit_score: 214
  • Evalue 5.20e-53

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 477
ATGTTTGCGACCGGCATCGGCTACGACGTGCATTGCCTGGTGGAGGGACGTCCCCTCGTGCTGGGCGGCGTGACCTTTGATTACCCGCTCGGGCTTGAAGGGCATTCCGATGCCGATGTGCTGTGTCATGCCATCGCCGATGCCATCCTCGGCGCGGCGGGCGAGCCCGACATCGGGCATCTTTTCCCCAATACGGATGAGTCGATACGGGGAATCAGCAGCCTGGAGATCCTGCGGCGTGTACGCGCGGTGCTGGATGAGCGCGGGCATGTGCTGAATACCATCGACTCGACCCTCATCGCCGAGGCGCCCAAGATCGGGCCGCACCTTACGGCCATGAAGGAAAACATCGCCGGGGCGCTGGGCCTGCCTCCCGGTCATGTGGGCATCAAGGCCACGACCAATGAAAAACTGGGATTCCTCGGGCGCGGGGAAGGGATAGCCGCCATGGCGGTCGCCGCCATCGAACGTCAATGA
PROTEIN sequence
Length: 159
MFATGIGYDVHCLVEGRPLVLGGVTFDYPLGLEGHSDADVLCHAIADAILGAAGEPDIGHLFPNTDESIRGISSLEILRRVRAVLDERGHVLNTIDSTLIAEAPKIGPHLTAMKENIAGALGLPPGHVGIKATTNEKLGFLGRGEGIAAMAVAAIERQ*