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berkeley_reactor_200306_planktonic_scaffold_151594_175

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(186573..187574)

Top 3 Functional Annotations

Value Algorithm Source
ldhA; D-lactate dehydrogenase (EC:1.1.1.28) similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 328.0
  • Bit_score: 404
  • Evalue 2.70e-110
D-lactate dehydrogenase n=1 Tax=Rhodopirellula baltica WH47 RepID=F2ALW5_RHOBT similarity UNIREF
DB: UNIREF100
  • Identity: 60.1
  • Coverage: 328.0
  • Bit_score: 404
  • Evalue 5.70e-110
D-lactate dehydrogenase {ECO:0000313|EMBL:EGF29337.1}; TaxID=991778 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica WH47.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 328.0
  • Bit_score: 404
  • Evalue 8.00e-110

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Taxonomy

Rhodopirellula baltica → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1002
ATGAAAATCGCAGTGTTCAGCACGAAGCAGTACGACCAGAAGTTCCTTCTCGCCGCCAATGGCGCTGGGGAGCATGAGTTCAACTTCTTTGAGGAGAAGCTTAACTCCAATACCGTCTTCCTAGCCCAGGGGCACGATGCGATCTGCTGCTTCGTTAATGACATCCTGACCGCCCATGTGCTGGATCAGCTCAAGGCACTGGGGATCAAGTTCATCGCGCTGCGTTGCGCGGGTTTCAACCAGGTCGACATCCGCCATGCGGATTCCATCGGCATCAAGGTCACGCACGTCCCGGCCTACTCGCCCTTTGCGGTGGCGGAGTTTGCGCTCACGCTGATCCTCGCGCTGAACCGCAAGATTCACCGCGCCTACAACCGCGTGCGCGACGGCAATTTCTCCATCGAGGGCCTGCAGGGTTTTGACCTGAACGGCTGCACGATAGGTCTCGTCGGTACGGGCAAGATCGGTCGCGTGATGGCGCAGATCCTTTCGGGCTTCGGCGTGCGTGTGCTGGGCTACGACGTGTTTCCCAACAAGGAATTTGGCGCGATGGGCAAGTATGTTGATCTGGACACCCTCTTCGCCGAGTCCAACATCGTGAGCCTGCACTGCCCGCTTACCCCGGACACGTACCACATCATCGACCAGCACAGTATTGCCAAGATGAAGCGCGGGGTGATGATCATCAACACGAGCCGTGGCGCTCTTGTCGATGCTCCGGCGGTAATCGAGGGCCTCAAGAGCGGCCAGATCGGCTATCTCGGTCTCGACGTGTATGAGCAGGAGGCGGATGTCTTTTACGAAAACCTCTCCGAGGAGATCATTCAGGATGACGTGCTCCAGCGTCTCGTCGCATTTCCCAACGTTCTCGTGACTTCGCACCAGGCGTATTTCACAGACACGGCACTTAAGAACATCGCCCAGACCACGCTCGACAACGTGGCCGCATTCGCCAACGGCGAGGAATTGAAGAACGCCGTGACGATCGAGATGCTCCACTAG
PROTEIN sequence
Length: 334
MKIAVFSTKQYDQKFLLAANGAGEHEFNFFEEKLNSNTVFLAQGHDAICCFVNDILTAHVLDQLKALGIKFIALRCAGFNQVDIRHADSIGIKVTHVPAYSPFAVAEFALTLILALNRKIHRAYNRVRDGNFSIEGLQGFDLNGCTIGLVGTGKIGRVMAQILSGFGVRVLGYDVFPNKEFGAMGKYVDLDTLFAESNIVSLHCPLTPDTYHIIDQHSIAKMKRGVMIINTSRGALVDAPAVIEGLKSGQIGYLGLDVYEQEADVFYENLSEEIIQDDVLQRLVAFPNVLVTSHQAYFTDTALKNIAQTTLDNVAAFANGEELKNAVTIEMLH*