ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_151594_246

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(248331..249404)

Top 3 Functional Annotations

Value Algorithm Source
O-antigen polymerase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZT69_OPITP similarity UNIREF
DB: UNIREF100
  • Identity: 32.8
  • Coverage: 189.0
  • Bit_score: 83
  • Evalue 3.10e-13
O-antigen polymerase similarity KEGG
DB: KEGG
  • Identity: 32.8
  • Coverage: 189.0
  • Bit_score: 83
  • Evalue 8.80e-14
O-antigen polymerase {ECO:0000313|EMBL:ACB76523.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.8
  • Coverage: 189.0
  • Bit_score: 83
  • Evalue 4.40e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Opitutus terrae → Opitutus → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1074
ATGCTGCTGGTGACCGGGATGCTGGGAGCCTTCTGTGTTGCTGCAGAGATGGCTGGGGAACCGAGATGGAGAGATCGGCTTTGGCTCGTGGTGGCTCTCGTGGGCATCAGCCTGATAGCATTCGGGATCTTCCAGAGGCTCAGTGGAGCCAGGACGATTTTCTGGGCGGTCGGGGAAAAGACGGGCAACAGCTTTTTTGCGACCTTTCGCTATCACGCCAATGCTGGAGCGTTCATTAATCTCGTGATGCCATTCGTCCTGGCGCGCACGCTTTTGATTTTTCGCCGAGAATCGCCACAGTGGCAGAAGGCCTTTTGGACTATCGCGAGTTCCATAGTCGTTGCTTCTGCATTCATCAATGTCTCGCGAGCCGCGATGACTATTGCCCTCGTGCTGCTGCTCATTCTCGGGGCCTGGTGGCTCTTCTGCGAAAGGCGCACGAGGATCAGCCGCCCTGCGGTATGGGGTGGGGCGATCATGATAATCCTGATCGCAGGACTGCTGGCGTATGCTTTTGGAGCCGACCGTTTGGTTAAGCGGTGGCTGGAACCAAAGGATGGGAACGAGTTGTCGAATAATCTGCGGTATCAGGTCTATGACATCATCTGGAAGAAGACCCTGCCCTCTGTCGGTTGGGGCGGCAGCGGCCCAGGGACATTCGAGATGGTGTTTCCTCTCTCCATCAAGGAGTCGGGCAATGAGGCGGTCGGGCGGTGGTATTGGGTGAATGCCCATCAGGATTACCTGCAGGCCCTTACCGAGTGGGGAGTAATCGGTGCGATCCCATGGGCCGGACTGCTGTTGGGCGGCCTCGGAGTTGGCATCTGGCGTCTCGCCAGGCGCAGCGGCCAGTGGCGTTCCGAGCCTCGTTATTTTCTGCTCGCGGGATGCCTCTCCTTGCTGGGAGTTTCCCTGCATGCGCTGGTCGATTTCCCTTTCCAAATAGGCTCGCTTCAGCTTCTTGCGGCGATTGCATGTGCGGTCGCCTGGACCGTCGGAAGCGAGGAAGGAAATATCCCTGTAAGGCGGCGGCGGCGCAGAGCGATGCCTCGGGAAAGGGAAGAAGCCGCTTGA
PROTEIN sequence
Length: 358
MLLVTGMLGAFCVAAEMAGEPRWRDRLWLVVALVGISLIAFGIFQRLSGARTIFWAVGEKTGNSFFATFRYHANAGAFINLVMPFVLARTLLIFRRESPQWQKAFWTIASSIVVASAFINVSRAAMTIALVLLLILGAWWLFCERRTRISRPAVWGGAIMIILIAGLLAYAFGADRLVKRWLEPKDGNELSNNLRYQVYDIIWKKTLPSVGWGGSGPGTFEMVFPLSIKESGNEAVGRWYWVNAHQDYLQALTEWGVIGAIPWAGLLLGGLGVGIWRLARRSGQWRSEPRYFLLAGCLSLLGVSLHALVDFPFQIGSLQLLAAIACAVAWTVGSEEGNIPVRRRRRRAMPREREEAA*